Ogataea parapolymorpha: HPODL_02688
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Entry
HPODL_02688 CDS
T08137
Name
(RefSeq) Transcription initiation factor TFIID subunit 6
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
opa
Ogataea parapolymorpha
Pathway
opa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HPODL_02688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
opa03021
]
HPODL_02688
03036 Chromosome and associated proteins [BR:
opa03036
]
HPODL_02688
Transcription machinery [BR:
opa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
HPODL_02688
Coactivators
SAGA/TFTC/STAGA complex
HPODL_02688
Chromosome and associated proteins [BR:
opa03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
HPODL_02688
STAGA complex
HPODL_02688
TFTC complex
HPODL_02688
SAGA complex
HPODL_02688
SLIK complex
HPODL_02688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
CBFD_NFYB_HMF
TFIID-31kDa
Histone
Motif
Other DBs
NCBI-GeneID:
25772140
NCBI-ProteinID:
XP_013932478
UniProt:
W1Q709
LinkDB
All DBs
Position
VII:complement(544859..546358)
Genome browser
AA seq
499 aa
AA seq
DB search
MSSATGNNTARIPTSHTLWSPYDTVRDAAESLGLSSQLTEDVAKNLAMDVEYRIHEILEQ
ALKFMRHGKRKILTVSDVDRAMKVLNLEPLYGYDVSRPLVFKEAMVGPGQTLYYVDDDDV
EFEKLINQSLPKVPRFTSFTAHWLAIEGVQPTIPQNPNPAEIKQLPPNQRGSVDNILSLN
NDDVSLSTNPSNGLTTVEQNSQGRKKDLDVKPLVKHMLSKELQLYFDKSVAALLDETNES
LRAAALESLEADPGLHQLVPYFIQFVAETITHNLKNPTILTTMLMVIYSLLSNKSIFLDP
YIHAIMPCILTLLLAKKIGARSESEDDREQFRIRELAASLLQRIMREYGSSYTTLKPRIT
RTLLRAFLSSATKSSIGTQFGAMKGMKSLGKEVIRIIMVGNLKSWSTSILEGLDENSTSY
KILIENVMGCLSTMTDDGKLSKPSTTEGDNESNPRELGDDEMQKLRDRLGDILAKEVASQ
PNAREIYGGIFFRGIMRGL
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtgcaacaggtaacaatactgccaggatacccacgtctcacacattatggtca
ccatatgatactgtgagagatgcggccgaaagcttaggcctttcgagtcaattaactgag
gacgtggcaaaaaacttggccatggacgtcgagtaccgtattcatgaaattttggagcaa
gcattgaaatttatgaggcatggcaaaaggaaaatacttacggtatcagatgttgacagg
gctatgaaagtattgaaccttgaaccattgtacggctatgatgtttcgagacctcttgtt
tttaaagaagcaatggttggccctggtcaaacactgtactatgttgacgatgacgacgtc
gagtttgaaaagttaatcaatcaatcacttcctaaagttccaagattcacctcatttact
gcccattggcttgcgatagagggcgtgcagccaacaattcctcaaaacccaaatcctgcg
gagatcaagcaattaccccctaatcagagaggttcggttgataacatactgagcctgaat
aatgatgatgtatctttgtctaccaacccatctaacggattgacaacagttgagcaaaac
tcacaaggaagaaagaaagatcttgatgtgaaaccacttgtcaagcatatgctttctaaa
gagcttcagctatattttgacaagtctgttgctgcactactggatgagaccaatgaaagc
ctccgagcggctgctttggaatcattggaagctgatcctggactacaccagcttgtccct
tattttattcagttcgtcgccgaaacaataacacacaatttgaaaaatccaacgattttg
acaacaatgttaatggtgatatattctctactatccaacaagtctatatttcttgaccca
tacattcacgctataatgccatgcatactcactcttcttcttgctaagaaaataggagca
cggtcagaatcggaagatgacagggaacaatttagaattagggagctggcggcttccctc
ctccagagaatcatgcgggagtatggttcctcttatacaactcttaaacctagaataact
agaacgctcttgagggcattccttagcagcgccacaaagagttcaattggaacgcagttt
ggcgcgatgaagggcatgaaatctttgggtaaagaagtgattcgaattattatggtgggg
aacctcaaaagctggtctacctccattttagaaggccttgatgagaattccacaagctac
aaaatactaattgaaaatgtgatgggttgcctaagtacaatgaccgacgacggaaagctt
agcaagccatcgacaactgaaggtgacaatgagagcaatccccgtgagcttggggatgac
gaaatgcagaaactgagagatcgtttaggtgacatccttgcgaaggaagtcgcttcgcaa
ccaaacgcacgagagatatacggcggcattttttttcggggaattatgagagggctttaa
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