KEGG   Ogataea parapolymorpha: HPODL_02703
Entry
HPODL_02703       CDS       T08137                                 
Name
(RefSeq) Coatomer subunit beta
  KO
K17302  coatomer subunit beta'
Organism
opa  Ogataea parapolymorpha
Brite
KEGG Orthology (KO) [BR:opa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:opa04131]
    HPODL_02703
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:opa04147]
    HPODL_02703
Membrane trafficking [BR:opa04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    HPODL_02703
Exosome [BR:opa04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   HPODL_02703
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 Beta-prop_EML WD40_MABP1-WDR62_2nd EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_WDR19_1st Beta-prop_Nup120_160 PEP5_VPS11_N Beta-prop_IFT122_1st WD40_RFWD3 WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_SPT8 BBS2_Mid TPR_CcmH_CycH Clathrin MetallophosC
Other DBs
NCBI-GeneID: 25772155
NCBI-ProteinID: XP_013932495
UniProt: W1Q9L8
LinkDB
Position
VII:589437..591930
AA seq 816 aa
MKLDIKKLSSTRSDRVKGIDFHPTEPWVLTTLYSGKIEIWSYETGSVVKAIDVTNVPVRA
GKFVARKNWVVVGSDDFQIRVYNYNTGERVAQFEAHPDYIRSIAIHPTRSYVLTSSDDYT
VKLWNWDNNWKLEQIFEGHQHYVMSVAFNPKDSNTFASACLDKTVKIWSLGSRVPNFTLL
APESKGFNYVDYYPHGDKPYLITSSDDKSVKVWDYQTKSCVATLEGHSSNVSFAVFHSEL
PLIISGSEDASIKIWNSNTYKLEKSLNYSMERAWCVATKKGSSLMAVGFDTGHVVVKLGD
DKPLLSMDPMGKIVYSKHTDIYNSVIKASDAQLGDGEILPLTHKELGSIEIFPSTLKHSP
NGRFVTVTGDNEYIIYTALAWRNKMYGPALDFVWAQDSNYYAIRESASSVKIYKNFKEKT
SGQIDLIYAADKLFGGTLLTVKSDGFVSLYNWDTGDLVRRIDVEAEDVVWSENGELMLIV
SSETAYALRFDKDVFQEHLNNGTIDPQEGCEDCFEVLYDVQDQIVSGQWVGDVFIYTSSS
NRLNYLVGGSINNLAHFDKTMYLLGYLPRDNKVYVADKDINILSYYLSLSVLEFQTVVLR
GDLDQADELMANIDPKDIPKIARFLEQQGFKEKALELTNDSEQKFELAIETLNLTLAQEI
AEQDNSPHKWKKLGDIAMANWNLKLAKEAFIRCNDYASLLLLYTSVNDVAGLKKLSDECV
IAGKFNLAFSSAWAASDLSTCSEILLKTDRPAEAALLSKAYEKNNTTIDDKLSQWKLYLN
GIGKERLSSRLLDMKQNKSEAAAEKTEETLIDLEEE
NT seq 2451 nt   +upstreamnt  +downstreamnt
atgaagctggatattaagaaactttcaagtaccaggtcagatcgagtgaagggcatcgat
tttcatcctacagagccttgggttttgacaactctttacagcggaaaaatagaaatctgg
tcctatgaaaccggatctgtcgtcaaagcaattgatgttaccaatgtccccgttagagca
ggtaaattcgtcgcccgcaaaaattgggttgtcgttggatctgacgattttcagattaga
gtttacaactataatactggtgaacgcgttgctcaattcgaagctcatcctgactacatt
aggtccattgcaatccaccccactagatcgtacgttttgacttcatcggacgattacact
gtcaagctctggaactgggacaataattggaaattggagcaaatttttgaaggacaccag
cattatgtgatgtctgtcgctttcaatccaaaagattctaacacttttgcgtctgcttgt
ctggataaaactgtgaaaatctggtctcttggatctagggttccaaattttacacttctt
gcgcccgaatcaaaaggtttcaactatgttgattactatccacatggagacaagccttat
ttgatcacttcttctgatgataagtcggttaaggtttgggattaccaaacaaagtcctgt
gttgcaacattggaggggcactcttctaatgtgtcgtttgcagtttttcattccgaattg
cctttgatcatctctggatccgaagatgcttctatcaaaatctggaattcaaatacctat
aaattagaaaagtcgctgaattattcgatggagagagcatggtgtgtggcaacaaagaaa
ggttcaagtctgatggctgtaggtttcgacactggacacgttgtcgtcaaattgggggat
gataagcctttattatccatggaccctatgggcaaaatcgtttactcgaaacatactgat
atatacaattcggtgatcaaggcttctgatgcgcaattaggagatggagaaattttgccc
ttgactcacaaagagctaggaagtattgaaatatttccaagtacattgaaacattctcca
aatggaaggtttgtcacggttactggggacaacgagtacattatttacactgcactggca
tggaggaataagatgtatggtccagctttagatttcgtttgggcgcaggattctaattat
tatgctatcagagaatcggcatcctcagtcaaaatatacaaaaacttcaaagagaaaaca
agtggccaaatcgatttgatctatgccgctgataagctctttggtggaactttattgact
gttaaatccgatgggttcgtgtcgctgtacaattgggacacgggtgacttggttagaaga
attgatgttgaagcggaagatgttgtctggtcagaaaatggtgaattgatgcttattgtc
tcgagcgaaactgcttatgcacttaggttcgacaaagacgtctttcaagaacacttgaat
aacggaacaattgatccacaggagggatgcgaggattgctttgaggttctttacgatgtt
caggatcaaatagtgagcggtcaatgggtgggtgatgtgttcatttacacctcatcttcg
aataggctgaactatcttgttggaggttcgatcaacaacttggctcactttgataaaaca
atgtatttgttgggatatttaccgagagacaataaggtttatgttgctgacaaagacatc
aacatcttatcttattatttgtcactgtctgtcttagaattccagacagttgttttgcgc
ggcgaccttgatcaggcagatgagttgatggcgaatatcgaccctaaagacatcccaaag
attgccagatttttagaacaacagggtttcaaagaaaaagcactagaacttacaaatgat
tctgagcagaaatttgagctagcgattgaaacactgaatctcactcttgcgcaagaaatt
gcggagcaagacaacagtcctcacaagtggaaaaagctgggggatattgccatggcgaat
tggaatctcaagttagctaaagaagctttcatcagatgtaatgactatgcatcactttta
cttctttacacctcagtcaatgatgttgctggcctgaagaaattgagcgacgagtgtgtt
atcgctgggaaattcaacttagcattttcttctgcatgggctgcatcggacctgtccact
tgttctgagattcttctcaagacggacaggcctgcagaggctgctttgttgagcaaagcc
tatgaaaaaaataatacgactattgatgataaactatctcaatggaaactctatttgaat
ggaatagggaaagagagacttagctcaagactgcttgatatgaagcagaacaaaagtgaa
gcagcggctgaaaaaacagaggaaaccctcattgatttagaagaagagtaa

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