Ogataea parapolymorpha: HPODL_02703
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Entry
HPODL_02703 CDS
T08137
Name
(RefSeq) Coatomer subunit beta
KO
K17302
coatomer subunit beta'
Organism
opa
Ogataea parapolymorpha
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
opa04131
]
HPODL_02703
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
opa04147
]
HPODL_02703
Membrane trafficking [BR:
opa04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
HPODL_02703
Exosome [BR:
opa04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
HPODL_02703
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B-prop_COPA_B_2nd
TPR_COPA_B
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_EML
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_WDR19_1st
Beta-prop_Nup120_160
PEP5_VPS11_N
Beta-prop_IFT122_1st
WD40_RFWD3
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_SPT8
BBS2_Mid
TPR_CcmH_CycH
Clathrin
MetallophosC
Motif
Other DBs
NCBI-GeneID:
25772155
NCBI-ProteinID:
XP_013932495
UniProt:
W1Q9L8
LinkDB
All DBs
Position
VII:589437..591930
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AA seq
816 aa
AA seq
DB search
MKLDIKKLSSTRSDRVKGIDFHPTEPWVLTTLYSGKIEIWSYETGSVVKAIDVTNVPVRA
GKFVARKNWVVVGSDDFQIRVYNYNTGERVAQFEAHPDYIRSIAIHPTRSYVLTSSDDYT
VKLWNWDNNWKLEQIFEGHQHYVMSVAFNPKDSNTFASACLDKTVKIWSLGSRVPNFTLL
APESKGFNYVDYYPHGDKPYLITSSDDKSVKVWDYQTKSCVATLEGHSSNVSFAVFHSEL
PLIISGSEDASIKIWNSNTYKLEKSLNYSMERAWCVATKKGSSLMAVGFDTGHVVVKLGD
DKPLLSMDPMGKIVYSKHTDIYNSVIKASDAQLGDGEILPLTHKELGSIEIFPSTLKHSP
NGRFVTVTGDNEYIIYTALAWRNKMYGPALDFVWAQDSNYYAIRESASSVKIYKNFKEKT
SGQIDLIYAADKLFGGTLLTVKSDGFVSLYNWDTGDLVRRIDVEAEDVVWSENGELMLIV
SSETAYALRFDKDVFQEHLNNGTIDPQEGCEDCFEVLYDVQDQIVSGQWVGDVFIYTSSS
NRLNYLVGGSINNLAHFDKTMYLLGYLPRDNKVYVADKDINILSYYLSLSVLEFQTVVLR
GDLDQADELMANIDPKDIPKIARFLEQQGFKEKALELTNDSEQKFELAIETLNLTLAQEI
AEQDNSPHKWKKLGDIAMANWNLKLAKEAFIRCNDYASLLLLYTSVNDVAGLKKLSDECV
IAGKFNLAFSSAWAASDLSTCSEILLKTDRPAEAALLSKAYEKNNTTIDDKLSQWKLYLN
GIGKERLSSRLLDMKQNKSEAAAEKTEETLIDLEEE
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgaagctggatattaagaaactttcaagtaccaggtcagatcgagtgaagggcatcgat
tttcatcctacagagccttgggttttgacaactctttacagcggaaaaatagaaatctgg
tcctatgaaaccggatctgtcgtcaaagcaattgatgttaccaatgtccccgttagagca
ggtaaattcgtcgcccgcaaaaattgggttgtcgttggatctgacgattttcagattaga
gtttacaactataatactggtgaacgcgttgctcaattcgaagctcatcctgactacatt
aggtccattgcaatccaccccactagatcgtacgttttgacttcatcggacgattacact
gtcaagctctggaactgggacaataattggaaattggagcaaatttttgaaggacaccag
cattatgtgatgtctgtcgctttcaatccaaaagattctaacacttttgcgtctgcttgt
ctggataaaactgtgaaaatctggtctcttggatctagggttccaaattttacacttctt
gcgcccgaatcaaaaggtttcaactatgttgattactatccacatggagacaagccttat
ttgatcacttcttctgatgataagtcggttaaggtttgggattaccaaacaaagtcctgt
gttgcaacattggaggggcactcttctaatgtgtcgtttgcagtttttcattccgaattg
cctttgatcatctctggatccgaagatgcttctatcaaaatctggaattcaaatacctat
aaattagaaaagtcgctgaattattcgatggagagagcatggtgtgtggcaacaaagaaa
ggttcaagtctgatggctgtaggtttcgacactggacacgttgtcgtcaaattgggggat
gataagcctttattatccatggaccctatgggcaaaatcgtttactcgaaacatactgat
atatacaattcggtgatcaaggcttctgatgcgcaattaggagatggagaaattttgccc
ttgactcacaaagagctaggaagtattgaaatatttccaagtacattgaaacattctcca
aatggaaggtttgtcacggttactggggacaacgagtacattatttacactgcactggca
tggaggaataagatgtatggtccagctttagatttcgtttgggcgcaggattctaattat
tatgctatcagagaatcggcatcctcagtcaaaatatacaaaaacttcaaagagaaaaca
agtggccaaatcgatttgatctatgccgctgataagctctttggtggaactttattgact
gttaaatccgatgggttcgtgtcgctgtacaattgggacacgggtgacttggttagaaga
attgatgttgaagcggaagatgttgtctggtcagaaaatggtgaattgatgcttattgtc
tcgagcgaaactgcttatgcacttaggttcgacaaagacgtctttcaagaacacttgaat
aacggaacaattgatccacaggagggatgcgaggattgctttgaggttctttacgatgtt
caggatcaaatagtgagcggtcaatgggtgggtgatgtgttcatttacacctcatcttcg
aataggctgaactatcttgttggaggttcgatcaacaacttggctcactttgataaaaca
atgtatttgttgggatatttaccgagagacaataaggtttatgttgctgacaaagacatc
aacatcttatcttattatttgtcactgtctgtcttagaattccagacagttgttttgcgc
ggcgaccttgatcaggcagatgagttgatggcgaatatcgaccctaaagacatcccaaag
attgccagatttttagaacaacagggtttcaaagaaaaagcactagaacttacaaatgat
tctgagcagaaatttgagctagcgattgaaacactgaatctcactcttgcgcaagaaatt
gcggagcaagacaacagtcctcacaagtggaaaaagctgggggatattgccatggcgaat
tggaatctcaagttagctaaagaagctttcatcagatgtaatgactatgcatcactttta
cttctttacacctcagtcaatgatgttgctggcctgaagaaattgagcgacgagtgtgtt
atcgctgggaaattcaacttagcattttcttctgcatgggctgcatcggacctgtccact
tgttctgagattcttctcaagacggacaggcctgcagaggctgctttgttgagcaaagcc
tatgaaaaaaataatacgactattgatgataaactatctcaatggaaactctatttgaat
ggaatagggaaagagagacttagctcaagactgcttgatatgaagcagaacaaaagtgaa
gcagcggctgaaaaaacagaggaaaccctcattgatttagaagaagagtaa
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