Ogataea parapolymorpha: HPODL_02746
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Entry
HPODL_02746 CDS
T08137
Name
(RefSeq) Nucleoporin NUP85
KO
K14304
nuclear pore complex protein Nup85
Organism
opa
Ogataea parapolymorpha
Pathway
opa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
HPODL_02746
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
opa03019
]
HPODL_02746
03036 Chromosome and associated proteins [BR:
opa03036
]
HPODL_02746
Messenger RNA biogenesis [BR:
opa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
HPODL_02746
Chromosome and associated proteins [BR:
opa03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
HPODL_02746
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
RA
Motif
Other DBs
NCBI-GeneID:
25772196
NCBI-ProteinID:
XP_013932537
UniProt:
W1Q7Y7
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All DBs
Position
VII:660237..662336
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AA seq
699 aa
AA seq
DB search
MSLLKPNGGTQLAEPEDLDFEIEIDPQTQLPITKLPYDDAPIAKSDLSWLKNGRTLQFSL
DKAHDNGMLFLASRDENKMEPLNDRERKLYPFGIPSNIDTSEEYVKFLTKTYRTFEPLLT
NQAYKHFSDDDEDMTFGVLSKIEENRKDKKQTLQSIITAMVENLKSLISIKSKLDPNFEE
TFIFNYEEILNVLNLLNAVHFSNKEERIALLSVWINRADIQPDDELFEEVMSFEHPYKNF
LFWSTYMKKLLLRGFFKEALEALDKSNWTDLKHEDANLFNVLTDFKNLLESYDMLRFSVD
SKEFLIWKQMMVELRERVKSLSFSEAGLASEVSELITIMSGSSNSILEASSTWYEALYAH
YLYQLPSMELLDEYLQVSIDKYPPETTQSWETMCIELLQGKFLSVISSIELLDKSIATFV
VVLMASAGLLKGYLSVVSFTEASLISTIDQMLEDLSFSYLTHRQLFPIGVGILILINNSN
SREIVSELLPRYHITSNDDLEWCLSICAKLKLHQTAVKIYKIQGARLASVGYLYEALYCY
TEAGDYTRLTKLAWEIFEKILVGELEDETLITKIRSNEISEPALRQALSPLALLDEFLQK
KDQPSFRNLFQLLNFKYLPKHYKMSLVVLIEPYLEKRVLKTEELVELIKVLNGFEKEADD
ETLAAAQKLCSRQVPNFDLKQELLSVRKKIGYEMSLNFL
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgtcacttctaaaaccgaatggcgggactcaacttgctgaaccggaggacttggacttt
gagattgaaattgatccacagacgcaattaccaattacaaaacttccttatgatgatgca
cccattgctaaaagtgatctcagctggctgaagaatggacgcactttgcaattttcgctg
gacaaggcacacgacaatggaatgctgtttttggcgtcccgagacgagaacaagatggaa
cctttgaacgaccgtgagcggaaactttatccatttggaataccttcaaatatagacact
tctgaggagtacgtcaagttcctcaccaaaacgtaccgcacttttgagccgctactgaca
aaccaagcatacaagcatttcagtgatgatgacgaagacatgacatttggcgtgttaagc
aaaattgaagagaatcggaaagataaaaaacagacgttacaatccattatcacagccatg
gtggaaaacctcaaaagcttaatctccattaagtccaagcttgatcctaatttcgaggaa
actttcattttcaattatgaggagattctcaacgtcctcaacttactgaatgctgtgcat
ttctccaacaaggaagagagaatcgccttactttctgtttggatcaaccgcgccgatata
cagccagacgacgagcttttcgaagaggtgatgagctttgagcacccttataaaaacttc
ctcttctggtccacgtatatgaagaaacttttgctccgtgggtttttcaaagaggctttg
gaagcgctggacaaaagcaactggaccgatttgaaacacgaagatgctaatctgtttaac
gtcctgaccgatttcaagaaccttttggagtcctacgatatgctcaggttctctgtcgat
tctaaggagtttctgatctggaaacaaatgatggtcgagctgcgtgagagagtcaagtcg
ctgagtttctccgaggcaggactggcttcagaggtgtctgaacttatcacgatcatgtcc
ggatcttcaaatagtatactagaggcctccagtacatggtatgaagcactttatgcgcac
tatctctaccagctgccgtccatggagctcctcgatgagtatcttcaagtgtccattgat
aaatacccgcctgaaaccactcagtcctgggaaaccatgtgcattgagctgttgcaagga
aagtttctgtctgtgatcagctcgattgagttgcttgacaagtcaattgccacgttcgtg
gtagttcttatggcctctgctggtcttttgaaaggatacttgtctgttgtgtcattcaca
gaggcatcccttatttcgacaattgaccagatgctggaggacttatctttctcatatttg
acccatcgccaattgtttccgattggtgtcggaatcttgattcttatcaacaactcaaat
tccagagaaatcgtttctgagcttcttcccagataccacatcacgagcaatgatgatttg
gagtggtgtctatcgatttgcgccaaacttaaactgcatcaaacagcagtgaaaatatac
aagatccagggtgcaagactggcctcagtagggtatctatacgaagctctatactgttac
actgaggcaggggactacacgcgactgactaagctggcgtgggaaatcttcgaaaagata
ctggttggcgagctggaagacgaaactttgataaccaaaattcggtccaacgagatttca
gagcctgctctgcgacaagcactaagtccactggctcttttggacgagtttttacaaaag
aaagaccaaccgagttttagaaatcttttccagctgctgaatttcaagtatctgccgaaa
cactacaagatgtcgctggtggtactgatagagccgtatttggaaaagagagtgctaaag
accgaggagttggtggaacttattaaggttctgaacgggtttgagaaggaggcggacgac
gagactctcgccgcggcccagaagctttgttcgcggcaagtgccgaatttcgatctaaaa
caagaacttctttcggtacgcaaaaaaattggctacgagatgagtttgaattttttatag
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