Ogataea parapolymorpha: HPODL_02773
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Entry
HPODL_02773 CDS
T08137
Name
(RefSeq) WD40 repeat-containing protein
KO
K14961
COMPASS component SWD1
Organism
opa
Ogataea parapolymorpha
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
opa03036
]
HPODL_02773
Chromosome and associated proteins [BR:
opa03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
HPODL_02773
COMPASS/SET1 complex (yeast)
HPODL_02773
MLL-HCF complex
HPODL_02773
MLL3/MLL4 complex
HPODL_02773
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_EML_2
WD40_Prp19
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_2nd
WD40
EIF3I
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_Aladin
Beta-prop_WDR19_1st
WDR55
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
Beta-prop_EML
WD40_RFWD3
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Tricorn_2nd
WD40_MABP1-WDR62_1st
Beta-prop_ACSF4
Beta-prop_IFT140_1st
eIF2A
WD_LRWD1
Beta-prop_LRRK2
Cytochrom_D1
WD40_Gbeta
Beta-prop_TEP1_2nd
Beta-prop_RIG_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_NUP159_NUP214
Beta-prop_DCAF4
RAB3GAP2_N
Syncollin
Motif
Other DBs
NCBI-GeneID:
25772223
NCBI-ProteinID:
XP_013932565
UniProt:
W1Q9S8
LinkDB
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Position
VII:complement(704907..706121)
Genome browser
AA seq
404 aa
AA seq
DB search
MNLSLLDPFAVAKEYPDTLAQTLAYGHSTQVRYSYKGDYLASGLVDGIILIIDTDTNSTI
QVLRDHTRAITSLNWSPCGQYLLSSSKDWKVNLWDLGTCKVIRSYNFEGPVWCSVMNPQN
HFQFVAALVDNDPVFADLENEPKITKLDTNPLGQPNTVKQSTLTATMTPDSNYILTGTSK
GWLNVIDTHSLQIVRSLNVCSSNIKNIEISPNCSKLAVNSSDRIIRQYTMPDTSVPAENW
EFELENRYQDAVNRLQWNALKFNHNSEYMCASTLGATHDVYIWETGMGSLVKILEGSNDE
LLAVDWNYRKCSIVATTMDTGTLFIWSVVIPQKWSALAPDFEEIEENIDYEEKEDEFDYV
DEDDMNKQIEEEGDEIDVIQREEVDARGFPFVDSFVIESVPVSE
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgaatctctcgcttttagacccctttgccgtggctaaagaataccctgacacactcgca
cagacgctcgcatacggtcattctacgcaggtacggtacagctataaaggcgactacctt
gcgtcggggctcgtcgatggcattattctcatcatcgacacggacacaaacagcacgatc
caggtgctccgggaccacacgcgcgccatcacgtcgctgaactggtcgccctgcggacag
tatttgctttcctcgtccaaggattggaaggtgaacctgtgggacctgggaacgtgcaag
gtgatccggagttataatttcgaaggacccgtctggtgcagcgtgatgaacccgcagaac
cactttcaatttgttgcggcgctggtcgacaacgatcctgtttttgcagacctcgagaac
gagcccaaaatcaccaagctagacaccaatccgctgggccagccaaacacagtgaaacag
tctacgctgacggctacaatgacccctgacagcaactacattctcacagggactagcaag
ggctggttgaacgtgatagatacgcatagtctgcaaattgtgcgctcgttgaatgtttgc
agctcgaacataaaaaatatagagatttcgcccaactgctcaaaattggccgtcaactcg
agcgaccggatcatccgacagtacacgatgccggatacctctgtcccggcggaaaactgg
gagtttgagcttgaaaaccggtaccaggacgccgtgaaccgactgcagtggaacgcgttg
aaattcaaccataactcggaatacatgtgtgcttccactctcggagcgactcacgacgtg
tacatctgggaaaccggaatggggtcgttggtgaagattctggaaggctcgaacgacgag
ctgctggctgtggactggaactatcgcaaatgttctatcgtggccaccacgatggacacc
ggcacgcttttcatctggtcggtggtgattccgcagaagtggagtgcgctggcgcccgat
ttcgaggagattgaggagaacattgattatgaagagaaggaggacgagttcgactacgtc
gacgaggacgacatgaacaagcagatcgaggaagagggcgacgagatcgacgtcatccag
cgcgaggaggtggacgctcgcggattcccgtttgtggactcgtttgtgatcgagagcgtg
cctgtttctgagtga
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