Ogataea parapolymorpha: HPODL_02839
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Entry
HPODL_02839 CDS
T08137
Name
(RefSeq) Component of the commitment complex
KO
K13095
splicing factor 1
Organism
opa
Ogataea parapolymorpha
Pathway
opa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
HPODL_02839
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
opa03041
]
HPODL_02839
Spliceosome [BR:
opa03041
]
Complex A
Other components
Complex A specific factors
HPODL_02839
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
zf-CCHC
zf-CCHC_3
KH_1
zf-CCHC_5
Zn_ribbon_RanBP
zf-CCHC_2
DZR
PHD_4
Motif
Other DBs
NCBI-GeneID:
25772288
NCBI-ProteinID:
XP_013932636
UniProt:
W1Q8A5
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All DBs
Position
VII:<804639..>805805
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AA seq
388 aa
AA seq
DB search
MFSGEPQRVARLDGFEVPTLLNVSLTPEQLEAVQVMVRIEEINRMIQTDSFVPPTRTRSP
SPPPVYDASGKRTNTREQRYRRRFETERGRLIENALRNIPDYRPPPDYRRQTKTSDKLYI
PAREHPEINFIGLLMGPRGHTLKKIQEKSGAKIGIRGKGSVKEGKNTALIRPDQNNLDDD
LHCLITADSEEKIQKAMKLCSEIIQGAISAPEGQNEHKRDQLKQLAILNGTLRASDEKLC
LNCGEKGHKRYECPNLGKQNFAQSLVCSRCGNIGHLARDCKADLEETARHGRDLEMMMRD
LEGEADGYAQSEMTQIEWSNAAPEAVSTADAPAVSSSPPAIAAPPGMKLGTTPMFAPPPP
KMSPPPKMAPPPMPKHLKLPITKKADTD
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgttttctggggaaccacaaagagtcgcaagactggacgggttcgaagtcccaacgcta
ctaaatgtgtccctgacaccagaacagctcgaggccgtgcaggttatggtgcggatcgag
gaaatcaaccggatgatccagacagattcttttgttcctcccacaagaacaaggtccccg
tctccgccaccggtgtacgatgcgagcgggaaaagaaccaacacgcgtgaacagcgctac
agaagacggtttgagaccgaaagaggccgcttgatagaaaacgcgctgcgaaacatcccc
gactaccggcctcctccagattatcgcagacagaccaagacaagtgacaaattgtacatt
ccggcccgtgagcaccccgaaatcaactttatcgggctgttgatggggcccagaggccac
acgttgaagaagatccaggaaaaaagcggcgcaaagatcgggatcagaggcaaagggtct
gtgaaagaaggtaaaaacacggcccttatacgaccggaccaaaacaatctagacgacgac
ttgcactgcctcatcacggccgactcggaagagaagatccagaaggccatgaagctgtgc
agcgagatcatccagggcgcgatcagcgctcccgagggccagaacgagcacaaacgggac
cagctcaagcagcttgccattctgaacggaacactgcgggcttcggacgagaaactgtgt
ctgaactgcggcgagaagggccacaagaggtacgagtgtccaaatctcgggaaacaaaat
tttgctcagtcgttggtgtgttcgcgctgcggcaacattggccatctggcacgcgactgt
aaggcggacctggaggagacggcaagacacggcagagaccttgagatgatgatgcgcgat
ctggaaggagaggccgatgggtacgctcagtcagagatgacacagatcgagtggtctaat
gctgcgccggaggctgtctccactgctgatgccccagctgtttcgtcctccccgccagcc
attgccgctccgcccgggatgaagctgggcaccacgccgatgtttgctccgccgccgcca
aagatgagtccgccgcccaaaatggcgcctccacccatgcccaaacatctcaagctacca
attacgaaaaaagccgatacggactga
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