Ogataea parapolymorpha: HPODL_02956
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Entry
HPODL_02956 CDS
T08137
Name
(RefSeq) Histone acetyltransferase type B subunit 2
KO
K10752
histone-binding protein RBBP4
Organism
opa
Ogataea parapolymorpha
Pathway
opa03082
ATP-dependent chromatin remodeling
opa03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
HPODL_02956
03083 Polycomb repressive complex
HPODL_02956
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
opa03036
]
HPODL_02956
Chromosome and associated proteins [BR:
opa03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
HPODL_02956
Histone modification proteins
HAT complexes
HATB complex
HPODL_02956
HDAC complexes
Sin3A-HDAC complex
HPODL_02956
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
HPODL_02956
PRC2.2
HPODL_02956
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
HPODL_02956
Heterochromatin formation proteins
Other heterochromatin formation proteins
HPODL_02956
Chromatin remodeling factors
NuRD complex
HPODL_02956
NuRF complex
HPODL_02956
NuRF complex (fruit fly)
HPODL_02956
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
CAF1C_H4-bd
WD40
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_EML_2
WDR55
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR75_1st
Beta-prop_EML
WD_LRWD1
MIOS_WD40
WD40_RFWD3
TAF1C_beta-prop
Beta-prop_DCAF12
eIF2A
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
25772403
NCBI-ProteinID:
XP_013932760
UniProt:
W1QAF3
LinkDB
All DBs
Position
VII:1000696..1001973
Genome browser
AA seq
425 aa
AA seq
DB search
MSSKQVSFGDLPIESSDDEHQSQDEEKSEELTILEEYKLWRKNCRYMYDFISETALTWPS
LSIQWIPGGTFENKTKDTKISKTRNLLLTTHTSGEDVNYLKIASTQIPASIWGNGPEISP
EELQQINSRLRISKKLDQESEINRVRAMPQNSRIISTINGKGDVFVYHLDAKMNEENRTR
LVHHTENGYGLSWNPIVEGELATCSDDQTVAVWDITRSGAEITPINVFTSHTSIVNDVRW
HTFSGNSLGSVSEDKHFIYQDKRTKEPAIDTILSTKTSFNTLCFSRFSKYLFSAGGEDGN
VYLYDLRDVSKPLHIMMGHTKSITNLEWDPFHENIVGSSSSDRRIILWDINKIGKEQLQD
EMEDGVPELLMMHGGHTGGINDFQFSEEIPWTVASCADDNIVHLWKVNRKVVEEEPSEVD
LSELE
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctaaacaggtcagctttggagacttgccgatcgaatcttctgatgatgagcat
caatcacaagatgaagagaagagtgaagaattgacgattctagaagaatacaagctttgg
cgaaagaattgtcgatacatgtacgatttcatcagcgagaccgcgttgacatggccctca
ttatccatacagtggatcccgggcggcacattcgagaacaaaacgaaggacacaaagatt
tccaaaactagaaaccttcttttgactacccatacttctggagaagatgtcaactatttg
aaaatagcgtccactcaaatacctgcttcaatttggggaaatggacccgaaatcagcccc
gaggagctacagcaaatcaactctagactccggatctccaagaagctagaccaggaatca
gaaatcaatagagtgcgcgctatgccgcaaaattctagaattatttccacgatcaatggt
aagggagacgtttttgtgtaccatttggacgctaaaatgaacgaagaaaataggactaga
ctcgtacatcataccgaaaatggctatggattgagctggaacccaattgtggagggagag
ctagctacgtgttctgacgaccaaacggtggccgtgtgggacatcactcgctcgggggca
gagatcacgcctattaatgtgtttactagccatacaagcattgtcaatgatgttaggtgg
cacacctttagcggcaactcactgggttctgtgtctgaggacaaacatttcatttaccaa
gacaaaaggacaaaagaaccagccattgataccattttgagcaccaaaaccagcttcaac
actctttgcttctcgagattctcaaaatacttattttctgccggtggtgaagatggaaac
gtgtacctttatgacttgagagatgtttccaagccccttcatataatgatgggacacaca
aaatctattacgaacctagagtgggatccgttccacgagaatatagttggatcttcctcc
tccgatcgccgcataatattgtgggatatcaataagatcggtaaagaacaattgcaagat
gagatggaagacggtgttcctgagctacttatgatgcacggtggacatacaggtggaatc
aacgatttccagtttagcgaagagatcccatggactgtggctagttgtgcagatgacaac
atcgtccatctttggaaagtgaataggaaagtcgttgaggaagagccttcagaagttgat
ttgtctgagctcgaatga
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