Ogataea parapolymorpha: HPODL_02991
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Entry
HPODL_02991 CDS
T08137
Name
(RefSeq) Ribosomal RNA-processing protein 12
KO
K14794
ribosomal RNA-processing protein 12
Organism
opa
Ogataea parapolymorpha
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
opa03009
]
HPODL_02991
Ribosome biogenesis [BR:
opa03009
]
Eukaryotic type
90S particles
Other 90S particles
HPODL_02991
Pre-60S particles
Other pre-60S particles
HPODL_02991
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
Motif
Other DBs
NCBI-GeneID:
25772438
NCBI-ProteinID:
XP_013932795
UniProt:
W1QAI6
LinkDB
All DBs
Position
VII:1051726..1055283
Genome browser
AA seq
1185 aa
AA seq
DB search
MATFEDDPLLLDMELESRIGRIRTQVNSKLENQKQLALVLQAVDENLEDQKQKQTPVTYF
ISFLSLLDQCCDGENIKDGNLAAVALYFLDLVSPYTPKQLLRSKFSEIVARLAPALSNDE
SAAPLLRSSIGVLESLLVAQETGAWINSNNFKISPKRGLTGLLQLSLDHRPKVRKRAQEA
VHKILSTVPAGPSLEHPASTLCGEFALNSVIKLLERQQQEKKNKELNTEIIHNLQLIAAI
TKANAWPLKQILPLCDVLLVVAKTSDQYLVSSSFEAFEGLFQSMNDKVDEDKFVQVLNVL
FDLKPAINDQHLTPSWLAVIARALTSYSKSVDAYKCILKLPDVFKIVGDFFLSENPNVRI
SASQCLIAIITDSVDVNYLLEPPKTLPEDFENVEEVIEQLSELTNEYLTVKYRESAKEVC
EVITSILAKFGSRAGPYFANHLHIIGEWRSNELEGFELNQVSENVIAVAISSIGPEEVLK
VLPLNLTNPQATGRAWLLPLLRDNVRHASLGFYISEILPNVEFFEQKIAEGNPESVNIKI
FATIVDQIWSLLPHFCDLPTDLTQSFTDDFASKLAGLLYEKTDLRNTICHALKLLVESNV
TYSLGVLEDVVLAQKFPLEEAQKNIEYLSTTKASKLLSVLFNVFSQTSMAQRGFVLDTID
AYLQISKPEDLSATFDKVCSILKQALDDEKETDMIKTEEPAAKSSIPKLSITMMDLIVLM
AKYVPESCYNALFSIFNQTVKIADVQIQKRSYRVISRLLEADAGQKSVLNFISNILSLLL
ETTETTMTAAKSPRFALILDIIKILPAENLHFIPAVVSEVIISTKSLNEKTRESAYETLI
VMAAKMAEFEGAPVKNSMNDPEMPDSTASLQEFFTICSAGLVGATPNMISAAITSLARLV
YEYHSKLDIQFLSELYQTVELFLTSKNREIIKATLGFVKVAILSLPEEMVAQNMKGLLTN
LMAASHEHKNHFKSKVKHIIERLIRKFGVDLVEESIPEEDKKLVANIKKSKARAKRKKSQ
ATGTNAAESGVMSGYEAALYSDSESEEEEDQPSGKSQQYISESREMPLDLLDKQTLTHIS
SSKPKKFTKKTLENEFKTKNGKLVIEEAEEQEDVLNKDSIDAYVEAVRQGPIRGQKNRLR
YKHKKGDDINWDEESDNESKSKPKTSNKIQKPQRKQKKFKSNRRL
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atggctaccttcgaagatgatcctctcctgttagacatggagttggaatcacgaattggt
agaataagaacacaggttaattccaaacttgagaatcaaaaacaactggcacttgtgctt
caggccgtcgatgaaaacttggaagatcaaaagcagaagcagactcctgttacatatttt
atctctttcctttctcttttagatcagtgctgtgatggtgagaacataaaagatggcaat
cttgctgctgtggctctttatttcttggacttggtgtctccatatacgccaaagcaactt
ctaagatcaaaattcagtgagatagttgcacgtctagctcctgccttgtctaacgacgag
tctgctgccccattactgagatcaagtattggtgtacttgaaagccttcttgttgcccaa
gagactggtgcctggattaattcgaataatttcaagattagccccaaaagaggcctcact
ggtctgctccagctgtcattggatcacagaccaaaggttagaaagagagcacaagaggct
gtgcacaaaattctgagcacggttccggctggtccttctcttgagcatcctgcctcaacc
ctttgtggcgagttcgcactaaactctgtcatcaagttgctggagagacaacaacaagaa
aaaaagaataaagagctcaatactgaaataatacacaacttgcaattgattgctgctatt
acaaaggccaatgcatggcctttgaaacaaatactgccgctttgtgatgttcttcttgtt
gtggccaagactagtgaccaatacttggtttcttcctcctttgaagcttttgaaggactc
tttcaatccatgaatgacaaagttgacgaagataagtttgttcaagtcttgaacgtgcta
tttgatctcaaacccgccattaatgaccagcatttgacaccatcttggctggctgttatt
gctagggctctcacttcctactccaagtctgtggatgcatacaaatgtattttgaagctg
ccagacgtctttaaaattgtgggagactttttcttgagtgaaaatcctaatgtccgtatc
agtgcttcgcaatgcctgattgcaattatcactgactctgttgatgtgaattaccttctc
gaaccaccaaagacactccctgaggatttcgaaaacgtcgaagaggtaatagaacagcta
tctgagctaacaaatgaatatctgacagtcaagtatagggaatccgccaaggaagtgtgt
gaagtcatcacaagcattttggctaagtttggatctcgtgcgggcccctattttgctaac
catctacatattattggagaatggcggtccaatgaattggaagggttcgaactcaaccag
gtcagtgaaaatgttattgctgttgctatcagttcgattggaccagaagaggttttgaaa
gtgcttccactgaatctaactaatccgcaagccactggaagagcttggctactaccgtta
ctgagggacaatgtaagacatgctagccttggtttttacatctctgagattcttccaaac
gtggaatttttcgagcaaaaaatcgctgaaggaaacccagaatctgtgaacatcaagata
tttgctaccattgtggatcaaatttggtctctcttgcctcacttctgtgatcttcctacc
gatttaactcaaagtttcaccgacgattttgcatctaaacttgcgggacttttgtatgag
aaaaccgatttgagaaacacaatctgtcatgctctcaagctcctggtggaaagcaacgtt
acctactcattaggcgttttggaagatgtggttttggcacagaaattccccttagaggaa
gctcaaaagaacatcgaatatctttcgactacaaaagcatccaaattgttgtcggtgcta
ttcaatgtcttctctcaaacttcaatggctcaaagaggttttgttctggatacaattgat
gcatatttgcaaatttcgaagccggaggatctttctgccacttttgacaaagtttgctca
atcttgaagcaggcactggatgatgagaaggaaactgatatgatcaagacggaggagccg
gctgcgaaatcgagcattccaaaattgtcgatcaccatgatggacttgatagtattgatg
gctaagtacgtccccgaatcttgctacaatgcgttattctcaatcttcaaccaaacagtc
aaaattgcagatgttcagattcaaaagcgttcttacagagtaattagtcgactactggaa
gctgatgctggacaaaaatcggttttgaatttcatatctaacattttgtctcttcttcta
gaaaccacagaaaccaccatgacagcagcaaagtcaccgagatttgcgctgattctggat
atcatcaagattttgccagcagaaaacctgcatttcattcctgctgttgtctcagaggtg
ataatcagcacgaagagtttgaacgaaaagaccagggaatctgcttacgagactctcatt
gtgatggctgctaaaatggctgaatttgagggagctccagttaaaaactcgatgaatgat
cccgagatgcccgattcgaccgcctcgcttcaagagtttttcaccatctgctctgcaggt
ttggtgggcgccactcctaacatgatcagtgctgctatcacttcgcttgctcgtctagtg
tatgaatatcactcgaaactagatattcaatttttatccgagctctaccagacagttgaa
ctattcttgacttccaagaatagggaaattatcaaggctacgcttggttttgtcaaggtt
gcgattttgagtttgccggaagagatggttgcacagaacatgaaaggtttactgaccaac
ttgatggctgcgtctcacgagcacaagaatcatttcaaatctaaggttaaacatatcatt
gagagactgattcgtaagttcggtgtcgatcttgttgaggaaagcatccccgaggaggac
aagaaacttgttgccaacatcaagaagtcaaaggctagggccaagagaaagaagtcgcaa
gctacaggtacaaatgctgcggagtcaggagtgatgtctggttacgaggcagctctgtat
agcgattccgaatccgaagaggaggaggatcagccatctggaaagtctcaacaatatatt
tccgaatctagagagatgccgcttgatctgctggacaaacaaacacttactcacatatcg
tcttcgaaaccaaagaaattcaccaaaaagactctggagaacgaattcaagaccaagaat
ggtaagttggtcattgaagaagccgaagagcaggaagatgtgctcaataaagactctatc
gatgcttatgtggaggcggttagacaaggtccaatcaggggccagaaaaacagacttaga
tacaagcataagaaaggagatgacatcaattgggacgaagagtcggacaacgagtccaaa
tcgaaaccaaaaacctccaacaagattcaaaaacctcagcggaaacagaagaagtttaaa
tctaacagacgtttatag
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