Ogataea parapolymorpha: HPODL_02998
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Entry
HPODL_02998 CDS
T08137
Name
(RefSeq) Polyubiquitin-A
KO
K08770
ubiquitin C
Organism
opa
Ogataea parapolymorpha
Pathway
opa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
HPODL_02998
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
opa04121
]
HPODL_02998
Ubiquitin system [BR:
opa04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
HPODL_02998
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
TBK1_ULD
Dsc3_N
Ubiquitin_5
Ubiquitin_3
Motif
Other DBs
NCBI-GeneID:
25772445
NCBI-ProteinID:
XP_013932802
UniProt:
W1Q8J4
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Position
VII:1066042..1068327
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AA seq
761 aa
AA seq
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MQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKS
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID
NVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVESSDTIDNVKSKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVESEIQDKEGIPPDQRRLIFAGMQLED
GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKSKIQDKEGI
PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGF
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgcagattttcgttaagactttgaccggcaaaactatcactttagaggtagaatcttct
gacacaatcgataatgtcaaatcgaagattcaagataaggaagggatccctcctgaccag
caaagacttatttttgctggtaagcagctagaagacggtagaactctgtccgactataac
attcaaaaggagtcgaccttgcacctggttttgagattgagaggtggtatgcaaatattc
gtcaagactcttaccggcaaaaccatcacccttgaagttgagtcctctgacacaatcgat
aacgtcaaatcgaagattcaggataaggaagggatccctcctgaccagcaaagacttatt
tttgctggtaagcagctagaagacggtagaactctgtccgattacaacattcagaaggaa
tctactcttcacttggttttgagactgagaggtggtatgcaaatcttcgtcaagactctt
acaggtaaaaccatcacgctcgaagtggagtcatcagatactattgacaatgtcaagtct
aagattcaggataaagagggtatcccacctgatcaacagagattgatctttgctggtaag
cagttagaagatggcagaactctctctgattacaacatccaaaaagagtccacgcttcat
ctcgtccttagactgagaggtggtatgcaaattttcgttaaaaccttgacaggaaagacc
atcactctggaggttgaatcttctgacactattgataacgtcaagtccaagatacaggac
aaggaagggattcctcctgatcaacaaagacttatctttgcaggtaagcagttggaggat
ggcagaactctctctgattacaacatccaaaaagagtccacgcttcatctcgtccttaga
ctgagaggtggtatgcaaattttcgttaaaaccttgacaggaaagactattacccttgag
gttgagtcttctgatactatcgataacgtcaagtccaaaattcaggataaagagggtatc
ccacctgatcaacaaagacttatcttcgctggtaagcaactcgaagatggtagaacgtta
tccgactataacattcaaaaggagtcgaccttgcacctggttttgagattgagaggtggt
atgcaaatattcgtcaagactcttaccggcaaaaccatcacccttgaagttgagtcctct
gacacaatcgataacgtcaaatcgaagattcaggataaggaagggatccctcctgaccag
caaagacttatttttgctggtaagcagctagaagacggtagaactctgtccgattacaac
attcagaaggaatctactcttcacttggttttgagactgagaggtggtatgcaaatcttc
gtcaagactcttacaggtaaaaccatcacgctcgaagtggagtcatcagatactattgac
aatgtcaagtctaagattcaggataaagagggtatcccacctgatcaacagagattgatc
tttgctggtaagcagttagaagatggcagaactctctctgattacaacatccaaaaagag
tccacgcttcatctcgtccttagactgagaggtggtatgcaaattttcgttaaaaccttg
acaggaaagaccatcactctggaggttgaatcttctgacactattgataacgtcaagtcc
aagatacaggacaaggaagggattcctcctgatcaacaaagacttatctttgcaggtaag
cagttggaggatggcagaactctctctgattacaacatccaaaaagagtccacgcttcat
ctcgtccttagactgagaggtggtatgcaaattttcgttaaaaccttgacaggaaagact
attacccttgaggttgagtcttctgatactatcgataacgtcgagtccgaaattcaggat
aaagagggtatcccacctgatcaacgaagacttatcttcgctggtatgcaactcgaagat
ggtagaacgttatccgactataacattcaaaaggagtcgaccttgcacctggttttgaga
ttgagaggtggtatgcaaatattcgtcaagactcttaccggcaaaaccatcacccttgaa
gttgagtcctctgacacaatcgataacgtcaaatcgaagattcaggataaggaagggatc
cctcctgaccagcaaagacttatttttgctggtaagcagctagaagacggtagaactctg
tccgattacaacattcagaaggaatctactcttcacttggttttgagactgagaggtggt
ttctga
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