Ogataea parapolymorpha: HPODL_03021
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Entry
HPODL_03021 CDS
T08137
Name
(RefSeq) DNA repair protein rhp51
KO
K04482
DNA repair protein RAD51
Organism
opa
Ogataea parapolymorpha
Pathway
opa03440
Homologous recombination
opa03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HPODL_03021
03460 Fanconi anemia pathway
HPODL_03021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
opa04131
]
HPODL_03021
04121 Ubiquitin system [BR:
opa04121
]
HPODL_03021
03400 DNA repair and recombination proteins [BR:
opa03400
]
HPODL_03021
Membrane trafficking [BR:
opa04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
HPODL_03021
Ubiquitin system [BR:
opa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
HPODL_03021
DNA repair and recombination proteins [BR:
opa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
HPODL_03021
RecA family proteins
HPODL_03021
FA (Fanconi anemia) pathway
Other FA pathway factors
HPODL_03021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad51
RecA
AAA_25
HHH_5
ATPase
DnaB_C
AAA_22
Motif
Other DBs
NCBI-GeneID:
25772468
NCBI-ProteinID:
XP_013932827
UniProt:
W1Q8L5
LinkDB
All DBs
Position
VII:1117414..1118523
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AA seq
369 aa
AA seq
DB search
MTQVAEVNHTMSNEQQSSIGEQELATGYHESMVAEDDEDYSAGPVPIQQLVGNGITPQDI
KKLKEAGFHTVESIAYTPKRHIVTVKGISEQKADKLLMEASKLVPLGFTTATEFHQRRSE
LICLTTGSKQLDTLLGGGIETGAITEVFGEFRTGKSQLCHTLAVTCQLPIDNGGGEGKCL
YIDTEGTFRPIRLVAIARRFGLDENETLDNVAYARAYNADHQLQLLHQAASMMTESRFSL
LIVDSIMALYRTDYSGRGELSARQMHVAKFMRTLQRLADEFGIAVVITNQVVAQVDGGAI
FNPDPKKPIGGNIVAHSSTTRLYFKKAKGANRICKIYDSPCLAESETVFALGQGGVIDPS
DETEAAEDE
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgacccaagtcgctgaagttaatcacaccatgtccaacgagcagcaaagtagcattggc
gaacaagagctggccacgggataccatgagagcatggtcgccgaagacgatgaagactac
tctgctgggcccgtcccgatccagcaactagttggcaatgggatcacgccccaagatatc
aagaagttgaaagaggcgggttttcacactgtggaatccatcgcgtatactcccaagcga
cacatcgttaccgtcaaaggaatttctgagcaaaaggcagacaaactgctcatggaagcg
tcgaagctagtgccacttgggttcactaccgcaacagagtttcatcaaagaagatcagag
ctgatttgtttgacgacaggttcgaaacagttggatacccttttggggggtggtattgag
acaggagctatcacagaggtattcggagagtttagaactggaaagtcgcagctttgccac
acgcttgccgttacttgccaacttcctattgataatggaggaggagagggaaaatgtttg
tacattgacactgaaggcacttttagacctattcgactggttgccatagctagacggttc
ggacttgacgagaatgagaccttagataatgtcgcctatgcaagggcttacaacgcagac
caccaattgcagttgttgcaccaggctgccagcatgatgaccgagtcgcgcttctcttta
ttgattgtggactctataatggcgctttacagaaccgattatagtggaagaggagaatta
agtgccagacagatgcacgttgccaagtttatgcgtacgcttcagagactcgccgacgaa
tttggtatcgccgtggtgatcacaaaccaagttgttgcgcaagttgacggaggagcgatc
tttaatccagatccaaaaaagcctatcgggggaaatattgtcgcccattcctcgacaaca
agattgtacttcaaaaaagcgaagggtgcaaacagaatttgcaagatttacgatagtcca
tgtttggcagagagcgagactgtgtttgcattgggccagggcggagtcatcgatccttca
gacgagactgaggccgcggaagatgaataa
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