KEGG   Ogataea parapolymorpha: HPODL_03041
Entry
HPODL_03041       CDS       T08137                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit H
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
opa  Ogataea parapolymorpha
Pathway
opa03020  RNA polymerase
opa03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:opa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    HPODL_03041
  09124 Replication and repair
   03420 Nucleotide excision repair
    HPODL_03041
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:opa03021]
    HPODL_03041
   03400 DNA repair and recombination proteins [BR:opa03400]
    HPODL_03041
Transcription machinery [BR:opa03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     HPODL_03041
  RNA polymerase III system
   RNA polymerase III
     HPODL_03041
  RNA polymerase I system
   RNA polymerase I
     HPODL_03041
DNA repair and recombination proteins [BR:opa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      HPODL_03041
SSDB
Motif
Pfam: RNA_pol_Rpb8 RNA_pol_RpbG
Other DBs
NCBI-GeneID: 25772488
NCBI-ProteinID: XP_013932847
UniProt: W1Q8N3
LinkDB
Position
VII:1156167..1156613
AA seq 148 aa
MSSTLFDDIFSVQSLDSARYDKVSRIIANSTSSADTKLTLDINTELFPVSTGDSLSVTLA
KSLALEGAEDDQSMFSTNGSWRPPKPGQRSLMDEYDYVMHGTVYKFEEGKDDNISVYVSF
GGLLMCLEGNYRSLSSLKQENLYILIRH
NT seq 447 nt   +upstreamnt  +downstreamnt
atgtcgagcactcttttcgatgatattttcagtgtccagtcgttggatagcgctagatat
gacaaagtgtcaagaataatcgccaactccaccagttcagccgatactaaacttactctc
gatattaatacagaattatttccagtttccacaggcgattcgctatctgtgactttggca
aaaagccttgctctcgaaggggcagaggatgatcaaagtatgttttccaccaatggttct
tggagacccccaaagccaggtcaaaggtctttgatggacgaatacgattacgtcatgcac
ggaacggtttataagtttgaagaagggaaggatgataatatctccgtctacgtctcattt
ggtggactcttaatgtgcttagaaggaaactacagatccctttcgtcgcttaaacaggaa
aatctgtacattctcatcagacattaa

DBGET integrated database retrieval system