Ogataea parapolymorpha: HPODL_03084
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Entry
HPODL_03084 CDS
T08137
Name
(RefSeq) Histone acetyltransferase type B subunit 2
KO
K10752
histone-binding protein RBBP4
Organism
opa
Ogataea parapolymorpha
Pathway
opa03082
ATP-dependent chromatin remodeling
opa03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
HPODL_03084
03083 Polycomb repressive complex
HPODL_03084
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
opa03036
]
HPODL_03084
Chromosome and associated proteins [BR:
opa03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
HPODL_03084
Histone modification proteins
HAT complexes
HATB complex
HPODL_03084
HDAC complexes
Sin3A-HDAC complex
HPODL_03084
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
HPODL_03084
PRC2.2
HPODL_03084
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
HPODL_03084
Heterochromatin formation proteins
Other heterochromatin formation proteins
HPODL_03084
Chromatin remodeling factors
NuRD complex
HPODL_03084
NuRF complex
HPODL_03084
NuRF complex (fruit fly)
HPODL_03084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
CAF1C_H4-bd
WD40_Prp19
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_WDR19_1st
EIF3I
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
NBCH_WD40
Beta-prop_IFT140_1st
MIOS_WD40
WD40_RFWD3
Beta-prop_Vps41
WDR90_beta-prop_4th
eIF2A
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
25772529
NCBI-ProteinID:
XP_013932892
UniProt:
W1Q8S5
LinkDB
All DBs
Position
VII:1227855..1229186
Genome browser
AA seq
443 aa
AA seq
DB search
MAEASFVWNESSQGSPKEVGMSDSDPISEERREKYFIWKKNAPLLYDYIQTTSLLWPSLT
VQWFPDLEDIADTEYQQHRLLLGSHSSGFSKCESLHLYGLKTLRQTAKLVDIASDYDPLK
NEFIVKRNDWHDTKMSLIQKIPHRGEINRARYMPQNPDLIATITNRGHLYVFDRTKKPNN
YTEDEIDDSDDFSDIKLEFHQSEGWGLDWNRYNEGELASGSSDGTIALWDLTKFKKNTSD
KKPAQTTATGLEFQKRKYKTSTLQPTETAAAHDYGVNCLEYLYFHQNLIGTVGDDKKLKI
FDTRARMSSVKEDQLSESPINVVSFSRVNEFGCVIGTETGNISLHDLRHIEEPVRIVNQS
HNGALTCASWNPESGSLLATGSSDGTVKLWDWSCDPGDELRFVHGGHMLGVNDIDWNLHD
ARTLVSCSDDNSVQVWKPASTIL
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggccgaagctagctttgtctggaatgaatcttcgcaaggctcacccaaggaagtgggg
atgtctgacagtgaccctataagtgaagagaggcgcgaaaagtacttcatatggaaaaag
aatgcgccactactgtatgattatattcagaccacctctctgttgtggcccagtcttaca
gtccaatggtttccggatttagaggacattgcagatacagaataccagcagcaccgcctg
ttacttggatcacattcgagcggtttcagtaaatgtgaaagtctccatttgtacggactg
aaaacactcaggcagacagccaagcttgtagacatcgcctcagactatgatccactgaaa
aatgagtttattgtcaagcgcaatgactggcatgacactaaaatgtcgcttatacagaag
atccctcacagaggggagattaatagggcgcgctacatgccgcagaatccagacttgata
gcgactatcaccaacaggggacatttatatgtgtttgatcgcaccaagaagcccaataat
tatacggaggacgaaatagatgacagcgatgacttctccgatatcaagctggaattccac
caaagcgagggctggggtcttgattggaatagatacaatgaaggagaattggcttctggc
tcttcagacgggacgatagctttatgggacctgaccaagttcaaaaaaaatactagtgat
aaaaaaccagcccagacgactgccactggactcgagtttcaaaaacgcaaatacaagact
tcgacccttcagccgacggaaacggccgctgcccatgattacggagtcaattgtttagaa
tatctctattttcaccaaaatcttataggaacggtgggggacgataagaagttgaagatc
ttcgataccagggctcggatgagtagcgtcaaagaggaccagttgtccgagtcgccgatc
aatgtggtatcgttcagtcgtgtcaatgagtttggctgtgttataggcaccgaaacagga
aacatctctctccacgatctacgacatatcgaggagccagtgagaattgtcaaccagtcg
cacaatggagcgctcacttgtgcgtcttggaacccggagagcggctcactacttgcaacg
ggatcatcggacggaactgtcaaactatgggactggtcttgtgatccaggtgacgaattg
cgtttcgttcatggggggcacatgcttggcgtcaatgatattgattggaacttgcacgac
gccaggacgttagtgagttgttcggatgacaattctgtccaagtttggaaaccagcatca
acaattttgtaa
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