Ogataea parapolymorpha: HPODL_03148
Help
Entry
HPODL_03148 CDS
T08137
Name
(RefSeq) Constituent of Paf1 complex with RNA polymerase II, Paf1p, Hpr1p, Ctr9, Leo1, Rtf1 and Ccr4p
KO
K15175
parafibromin
Organism
opa
Ogataea parapolymorpha
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
opa03021
]
HPODL_03148
Transcription machinery [BR:
opa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
HPODL_03148
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC73_C
CDC73_N
Myb_DNA-bind_8
Motif
Other DBs
NCBI-GeneID:
25772592
NCBI-ProteinID:
XP_013932957
UniProt:
W1Q900
LinkDB
All DBs
Position
VII:complement(1340901..1341980)
Genome browser
AA seq
359 aa
AA seq
DB search
MSISLLRECIKNGKPIAFPEGEDISTAKVLILDGQEVSLDEETGFVSGDKINHVLRTVYQ
CWLHSESNTTEYIADCEAKNIPVVSFLERTELISYLNGSSETCAYLQGAVPEAQTGGEKR
TSTEYQGAAKKKREIDPFLREVLNNERNLIDHNRALQGTKPVDFSSVAKECEYKIIRAAK
QKTKAKGKVPEKSTASVGKNKEPIIILSPSASAILNMSNVKEFLQDGRFTNAADAGHSTS
NMLQIVRNSKRFDKRMKFLVVSNVEKFFTKPEYWDRVVAVFTTGQEWQFKNYKYNQPSLL
FQKVKGFYLYYNGDPIPDKIQQWNVQPIGIERTQRFKDRQTSEFLWESLERFMAGKGYR
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgtctatcagtctgctaagggaatgtattaagaatggcaagcccattgcgtttccggag
ggcgaggatatttccacggccaaggtgcttatcctggacggccaggaagtttctctggac
gaggagaccgggtttgttagcggagacaagatcaaccatgtcttgcgtaccgtttaccaa
tgttggctgcacagtgaatcgaacacgaccgagtatattgccgactgcgaggcgaagaat
atacctgttgtgagctttttggagagaacagagctgatctcgtatttaaacggatcgtct
gaaacgtgtgcctatttacaaggggcagtacccgaagcccagaccggcggcgaaaaacgg
acctctacggagtaccagggcgcggcaaagaagaagcgggagatagacccatttttgcgc
gaggttctaaacaacgaacgcaatctgatcgaccataatagggctctgcagggcacgaag
cctgtggatttttcgagcgttgccaaagagtgcgagtataaaattatccgcgcagcgaaa
cagaagaccaaggccaagggaaaggtgccggaaaagagtacggcatctgtggggaagaac
aaggagcctatcattattttgtcaccgtctgcgtctgctattttgaacatgagcaatgtc
aaggagttcctccaggacggaagattcaccaacgctgccgacgcaggacactcgacaagc
aacatgttgcagattgtgcgcaattcgaagcggtttgataaacgaatgaagttcttggtg
gtgagcaacgtggagaagtttttcacaaagccagagtactgggaccgggtggttgcagtt
ttcactacaggccaggaatggcagtttaagaactacaagtacaaccagccaagtctgctg
ttccagaaagtgaagggattctatctgtattacaacggagacccaattccggacaagatc
cagcaatggaacgtgcagccgataggaattgagcggacgcagcgattcaaggaccggcag
accagcgagtttctgtgggagagcctggagcggttcatggcaggcaagggctacagatga
DBGET
integrated database retrieval system
