Ogataea parapolymorpha: HPODL_03179
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Entry
HPODL_03179 CDS
T08137
Name
(RefSeq) hypothetical protein
KO
K18724
nucleoporin POM34
Organism
opa
Ogataea parapolymorpha
Pathway
opa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
HPODL_03179
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
opa03019
]
HPODL_03179
Messenger RNA biogenesis [BR:
opa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
HPODL_03179
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NPCC
Motif
Other DBs
NCBI-GeneID:
25772623
NCBI-ProteinID:
XP_013932990
UniProt:
W1QB13
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Position
VII:1394065..1395252
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AA seq
395 aa
AA seq
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MSFLTPTASSINGSYYTPDEDTFLQTRRRISFSNRGTLNSSTPVGSAHFTPSPRKPIPAL
SPSKSAGIPNTPIKPLLSSPFKVPQSTKPLISSTPLAGPNTPVKGPMSPLLRKKFQQQFP
GTPQLSEKQSPQSINSNIYQRSIFKPRHKSPLKESSNLPTQEKPAQVEPKDESELQSPYV
ELALSRIVNRDAEIRTVIINTLMMLLYRFLVAVIVLLNVKFRLRDGTSLFPAVLSQYSSY
VNRTVYGILLFNIGVSSLRLMKPQDKCLDLPLTSRQRKLLGLPLVNGMNVQEELEVDRSE
HKILPSSPTKDIADTSLLALDISRSFANMNISQTEKSPVTLVSETPQERIRKQLLSRDNG
PASPQARFKKPSSKFLYDTASAGGFDINNSDVSFY
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttcttacgcccacggcttcatctatcaatggatcatactatacaccagatgaa
gacacctttttgcagacaaggcggagaatcagtttttctaatcgaggcacgttaaactcg
tccactcctgttggatctgcgcattttacaccatctcccagaaaaccgatcccagcgttg
tctccaagcaagtccgctggcatacccaataccccaatcaaaccgttactttcatctcca
tttaaagttcctcagagcactaaaccgttaatatcttcaactcctttagcgggaccaaat
actcctgtcaaggggcccatgtcgcctcttttgcgcaagaaattccaacagcagtttccc
ggcactcctcagctgtctgagaagcaatcgccacaatcaatcaacagcaacatttatcag
cgatcgatattcaagccaaggcacaagtcacctttgaaagagagctcaaacctgccaaca
caagagaaaccagctcaagtcgaaccaaaggatgaaagcgagttgcaaagtccctacgtt
gagcttgctttgagtagaatagtcaatcgcgacgccgaaattcgcacagtgataataaac
accctaatgatgctactgtaccggtttcttgtggccgtgattgttctgctgaatgtgaag
tttaggcttcgtgatgggacatcgctattccctgctgtcctcagccaatattcgagttat
gtgaatcgcacagtttacggaatcctgctgttcaacatcggtgtgagctcgctgcggctg
atgaaacctcaggacaaatgtctagatctgcctttgactagtcgccagcgcaagttgctt
ggtcttccgctcgttaacgggatgaacgttcaggaagagctcgaggttgatcggtcggag
cacaaaattttgccgagtagcccaaccaaggacatcgcggacacgtcgctactagcgctt
gatatctcaagatcatttgcgaatatgaacatctcacagacagagaaatcgccggttaca
cttgtttccgaaacgcctcaggagaggattcgcaaacagctactttcgagggacaacggg
cctgcgtcgccacaggctcgtttcaaaaaaccctcgagcaaattcttatacgatactgcc
tctgcggggggattcgacatcaacaattccgacgtgtcgttctattag
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