Ogataea parapolymorpha: HPODL_03184
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Entry
HPODL_03184 CDS
T08137
Name
(RefSeq) tRNA pseudouridine synthase 4
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
opa
Ogataea parapolymorpha
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
opa03016
]
HPODL_03184
Enzymes [BR:
opa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HPODL_03184
Transfer RNA biogenesis [BR:
opa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HPODL_03184
Prokaryotic type
HPODL_03184
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
25772628
NCBI-ProteinID:
XP_013932995
UniProt:
W1QB18
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All DBs
Position
VII:1407669..1408784
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AA seq
371 aa
AA seq
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MYRRTLMDGIFAINKPSGVTSSNFLTRVNKIFNESEVFKPALDEIKKELHRTQPKGYKKK
LRQLKVKMGHGGTLDPLASGVLIVGVGSGTKKLGGYLNGSVKVYEAEALFGGSTTTGDSE
GQLLTISGVDHITKEKVELLKKMFVGHLQQTPPIFSALKMEGMPLYEYARRGLPLPRKIE
PREVQVYELDLKDDCLSTDHPYEFLKSEVDEDGTALVDKLSGNPTLNDHKVSFSKEYMEL
CDHDESLSRECEPLRTVKEFPDGFKAPLLHFTSKVSSGTYIRSLISDMGRAVGSSAYMVK
LIRRNQAEWDLEKNVFDIEDFEQDAKIWGPVLGKVFKEGASVNVKEELAALGMDRKLQEH
EQESKRVKVED
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgtcgtacccttatggacggaatatttgcaataaacaaaccttcaggggtcacc
tccagcaactttcttactcgtgtgaacaagatatttaatgagtctgaggttttcaagccc
gcacttgatgaaatcaaaaaagagctccatagaactcagcctaagggttataagaaaaag
cttcgccaacttaaagtgaaaatgggccacggtggtactttggaccctctagcgtccgga
gtactgattgttggtgttggatctggtactaagaagctgggaggctacttgaatggctct
gtcaaagtttatgaagcggaagcactctttggcggatcgacaacaactggagactccgaa
ggacaattgttgacaattagcggagtagatcatatcacaaaagagaaagtggaattgttg
aagaagatgtttgttggtcatttacagcagactccgccaattttcagtgcattaaaaatg
gaaggaatgccgctctatgagtatgcgagacgcggtctacctcttccccgcaagatcgag
ccaagagaagttcaggtgtatgagcttgatttgaaagatgactgtctcagcacagaccat
ccatatgaatttctcaagagtgaggtcgacgaagacggaacggcacttgttgacaagctg
agcggaaatccaacattgaatgatcacaaagtgtctttttcaaaagagtacatggaacta
tgtgatcacgatgaatcattgagtcgcgaatgtgagcctttgagaaccgtgaaggagttc
cctgatggatttaaagcaccactgcttcatttcacatctaaggtttcctcgggaacatat
ataaggtctttgatcagtgatatggggcgtgctgttggctcgtcagcgtacatggtgaag
cttattcgtcggaatcaagccgaatgggacttggaaaaaaatgtctttgatatagaggat
tttgagcaagatgccaaaatttggggccccgtgctcggcaaagtcttcaaagaaggggct
tctgtgaatgtgaaggaagagctcgcggcactaggcatggatagaaaacttcaagagcac
gaacaggaatccaaacgtgtcaaggtggaagattag
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