Ogataea parapolymorpha: HPODL_03247
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Entry
HPODL_03247 CDS
T08137
Name
(RefSeq) COMPASS component SPP1
KO
K14960
COMPASS component SPP1
Organism
opa
Ogataea parapolymorpha
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
opa03000
]
HPODL_03247
03036 Chromosome and associated proteins [BR:
opa03036
]
HPODL_03247
Transcription factors [BR:
opa03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
HPODL_03247
Chromosome and associated proteins [BR:
opa03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
HPODL_03247
COMPASS/SET1 complex (yeast)
HPODL_03247
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD
CpG_bind_C
DUF5783
PHD_5
Motif
Other DBs
NCBI-GeneID:
25772687
NCBI-ProteinID:
XP_013935027
UniProt:
W1QGA5
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All DBs
Position
IV:378138..379169
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AA seq
343 aa
AA seq
DB search
MSKVSLQERYNKFSKAAKYNLNSEELFCVCRRVDDGELMVACDGCDEWFHFSCMKLDPKY
KDLVSNFYCIFCDELLHKGSTLWKKKCRLAGCYKPVRIDADSQKASKYCSDEHGVEFMRN
ELLKRFSGSSKECRLREPEIASVVCGVADLDEFRVLGDSMPVYEGMDVDMPEELAQRVAQ
LDAELAELRRAEALYTSKEKYLLKLRDKIRLVNEVLAETEPEPAKKGKKPKIDVCGYDAT
LVLDDEQWRAYEASEECQKTLRLACWADLDATPEQAREAYHAQQRFAGLCMADRKKCVRH
LTWYSIQYDTVMLRLNEVLYRVAQLERAKERVAQEWRSQLLER
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaagtatcactccaggaacgctacaacaagttcagcaaggcggccaagtacaac
ctgaactcggaggagctgttttgcgtgtgtcggcgcgtggacgacggcgagctgatggtg
gcctgcgatggctgcgacgagtggttccatttttcgtgcatgaagctcgatcccaaatat
aaggacctagtgagcaatttttattgcattttttgcgacgagctgctgcacaagggctct
acgctatggaagaagaagtgtcggctggctggctgctataagccggtccgcatcgacgca
gactcgcagaaagcgtctaaatattgcagcgacgagcacggcgtcgaattcatgcgcaac
gagctgctgaagaggttcagcggctccagcaaggagtgccggctgcgcgagccggagatt
gcgagcgtggtgtgtggagtggccgacttagacgagttccgcgtgctaggagacagcatg
cccgtgtacgagggcatggacgttgatatgccggaggagctggcacagcgtgtggcgcag
ctggacgcggagcttgccgagctgcgccgcgctgaggcgctgtacacctcgaaggaaaag
tacctgctgaagctgcgggacaagatccgcctggtgaacgaggtgctggccgagacggag
ccagagccggcgaaaaagggaaaaaagcccaaaatcgacgtgtgcggctacgacgcgacg
ctggtgctggacgacgagcagtggcgcgcgtacgaggcgagcgaggagtgccaaaagacg
ctgcggctggcgtgctgggccgatctggacgcaacaccagaacaggcccgggaggcgtac
cacgcgcagcagcggtttgccgggctgtgcatggccgaccgcaagaagtgtgtgcggcac
ctgacgtggtacagcatccagtacgacacggtgatgttgagattgaacgaggtgctatat
agggtggcgcagctcgagcgcgcgaaagagcgcgtggcgcaggagtggcgcagccagctt
ctcgagcgataa
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