Ogataea parapolymorpha: HPODL_03254
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Entry
HPODL_03254 CDS
T08137
Name
(RefSeq) Heat shock protein 60, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
opa
Ogataea parapolymorpha
Pathway
opa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HPODL_03254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
opa03019
]
HPODL_03254
03110 Chaperones and folding catalysts [BR:
opa03110
]
HPODL_03254
03029 Mitochondrial biogenesis [BR:
opa03029
]
HPODL_03254
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
opa04147
]
HPODL_03254
Enzymes [BR:
opa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
HPODL_03254
Messenger RNA biogenesis [BR:
opa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HPODL_03254
Chaperones and folding catalysts [BR:
opa03110
]
Heat shock proteins
HSP60 / Chaperonin
HPODL_03254
Mitochondrial biogenesis [BR:
opa03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
HPODL_03254
Exosome [BR:
opa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HPODL_03254
Exosomal proteins of other body fluids (saliva and urine)
HPODL_03254
Exosomal proteins of breast cancer cells
HPODL_03254
Exosomal proteins of colorectal cancer cells
HPODL_03254
Exosomal proteins of bladder cancer cells
HPODL_03254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
25772694
NCBI-ProteinID:
XP_013935035
UniProt:
W1QD17
LinkDB
All DBs
Position
IV:<394056..>395765
Genome browser
AA seq
569 aa
AA seq
DB search
MLRFARPQIKKNLASLARTYAHKELKFGVEGRAALLKGVETLADAVAVTLGPKGRNVLIE
QPFGAPKITKDGVTVAKSVNLEDKFENLGAKLLQDVASKTNESAGDGTTSATILGRAIFS
ESVKNVAAGCNPMDLRRGSQAAVEAVIDFLQKNKKEITTSAEIAQVATISANGDTHIGKL
LASAMEKVGKEGVITIKEGKTLEDELEVTEGMRFDRGYISPYFITEAKSGKVEFENPLLL
LSEKKLSSIQDILPSLEISNKLRRPLLIIAEDVDGEALAACILNKLRGQVQVACVKAPGF
GDNRKNILGDIAILSGGTVFTEELDIKPENATPELLGQCGSVTVTKEDTVILNGAGEKDN
ILQRCEQIKGAIEDASTSEYEKEKLHERLAKLSGGVAVVRVGGSSEVEVGEKKDRYDDAL
CATRAAVQEGILPGGGTALLKASKVLDQIEVENFDQKLGVQIIKAAITKPAKRIVDNAGE
EGSVIIGKILDTYGDKFNHGYDSSKGEFVDMIQSGIIDPFKVVKSGLVDAAGVASLLATT
ECAIVDAPEPKGPPAAPAGGMGGMPGMGF
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgctaagatttgcacgtcctcaaatcaagaagaaccttgcttctctggcccgtacatac
gctcacaaggagctgaaattcggtgtggaaggcagagctgcccttttgaagggtgttgaa
actcttgctgacgctgttgccgtcaccttgggtccaaaaggtcgtaatgttctgatcgag
cagccatttggtgctccaaagatcaccaaggatggtgtgactgtggccaagagcgtcaat
cttgaagacaagttcgagaacttaggtgctaagctgttgcaagacgttgcctccaagacc
aatgagagcgccggtgacggtactacctctgccactattcttggaagagccattttctct
gagtctgtcaagaacgtggctgccggatgcaaccctatggacctcagaagaggttcgcag
gccgccgttgaggccgtgatcgactttttgcagaagaacaagaaggagatcacaacctct
gccgagatcgcccaggtggccaccatctctgccaacggcgacacccacattggtaagctt
ttggcatctgccatggagaaagttggcaaggagggcgtgatcacaatcaaggaaggtaag
accctggaggacgaattggaagtcaccgagggtatgagatttgacaggggctacatctct
ccttacttcatcactgaggccaagagtggaaaggttgagtttgagaaccctctgttgttg
ctgtctgagaagaaattgtcttcaatccaggacattcttccaagcttggagatctccaac
aagctgagaagaccattgctcattattgccgaggacgttgacggggaggccttggctgcc
tgtatcctgaacaaattgagaggccaggtccaggttgcttgtgttaaggctccaggcttc
ggagacaacagaaagaacattttgggcgacattgccattttgtccggaggtactgtcttc
actgaggagttggacatcaagccggagaatgccactccagaactcttgggccagtgtgga
tctgtcacggttaccaaggaggacactgtcattttgaatggtgccggagagaaggacaac
atcttgcaaagatgtgagcagatcaagggcgctattgaggacgcttcgacctccgagtac
gagaaagagaagcttcacgaaagactggccaagctttccggcggtgtggcagttgtgaga
gtgggtggctcttccgaggtcgaagttggagagaagaaagacagatacgacgatgctctg
tgtgctacccgtgcagctgttcaggaaggtattctgccaggtggaggtactgctcttttg
aaggcttccaaggttttggaccagatcgaggtcgaaaactttgaccagaagttgggtgtg
caaatcattaaggctgccatcactaagccagccaagagaatcgtcgacaacgctggcgag
gagggatctgtcatcattggcaagatcttggatacatatggcgacaagttcaaccacgga
tacgacagctccaagggtgaatttgtggacatgattcagtccggtatcattgacccattc
aaggtcgtcaagagcggtctggtcgacgccgctggcgttgcctccctgctggctaccacc
gaatgcgctatcgtcgatgctccagaaccaaagggtccaccagctgctccagccggcggc
atgggcggtatgccgggaatgggcttctaa
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