Ogataea parapolymorpha: HPODL_03407
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Entry
HPODL_03407 CDS
T08137
Name
(RefSeq) Nucleoporin NUP49/NSP49
KO
K14307
nucleoporin p58/p45
Organism
opa
Ogataea parapolymorpha
Pathway
opa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
HPODL_03407
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
opa03019
]
HPODL_03407
Messenger RNA biogenesis [BR:
opa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
HPODL_03407
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG
UAF_Rrn10
zf-C4H2
Motif
Other DBs
NCBI-GeneID:
25772847
NCBI-ProteinID:
XP_013935193
UniProt:
W1QEV6
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Position
IV:690376..691944
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AA seq
522 aa
AA seq
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MFGNTAGASSTGGTGFSFGGSNASKPAFSFGNTQNNTPAGSQPNSTGGLFGANNNNTTGS
TNIFGANSNTSNASTGFGNTNSSTSGGLFGNNTTSGGLFGQNNTSTAPKPAFSFGNNANN
TNQTGASANTGFSFGGASNTQNNTQTGNQTGGLFGSSSTSAPSTNTGFSFGNTNNAANNT
SNTSTSLFGNKPGGLFGQPSQPTGTGSSLFGGNQQSGSGGLLGNQQNTVGTSGGLFGNQQ
NSSLGGTGSLFGNQQNTSGTSGALFGNQQQNTNLNQPQLPPLNPMTKVSDLPEAFQKELE
QLDQYIQTQVAIAERLKNDEDEHKELINSIPRDIDFLEKRYFSTNQALNSDLKFVESFKN
KTLENFDNWVEKLIKVYLQLTNPMILGMSNNEQAKSADGTVTQIIGVNGVRTAGLLQSQP
SKSQQLDKDSHVNVPQILNSYYSAKIEEFRQNIDKYQLILQEVENSISDLDKVSLSGGPA
IGSYGLDMIVSTLKEEFQLYVELANEFAEVHHQVKRLDDGSI
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgtttggcaacacagcaggcgcctcatctacaggcggaacaggcttctctttcgggggc
tctaatgcttcgaagcctgcattttcctttgggaacactcaaaacaatactccagctggc
tcccagcccaattctacaggcggtctgtttggggccaataacaacaataccacgggatct
acaaacatctttggggccaattcgaatacaagcaatgcgtcaactggatttggaaacaca
aattcctcgacttctggaggattatttggaaataacaccacctcaggtggattatttggc
caaaacaatacgtccaccgcaccaaaaccagcattctcgtttggtaataatgcaaacaat
accaatcaaacaggagcctccgcaaacacaggtttctcatttggaggagcttcgaacact
caaaataatacgcaaactggcaaccaaactggaggccttttcggatcctcaagcacttct
gctccttccacgaatacgggattctctttcggaaataccaacaatgcagccaataataca
tccaatacgtccaccagtttatttggaaataaacctggagggctatttggacaaccgtct
caacctaccggcacaggctcttcactatttggaggaaatcagcaatcaggctcaggtggc
cttctgggtaaccagcaaaacactgttggcacatcgggaggtctttttggcaatcaacaa
aatagcagtttaggaggcacaggcagtctttttggcaaccaacaaaatacatctggaacg
tctggagcattatttggcaaccagcaacaaaatacaaatctcaaccagccccaactgcct
ccgttaaaccctatgaccaaagtgagcgatctaccggaggcttttcaaaaagagctggag
cagctggaccaatacattcagactcaagtggctattgcggagcgactaaagaacgacgag
gatgaacacaaagaacttatcaacagcattcctagagacattgatttccttgagaaacgt
tacttttctactaaccaggctcttaatagcgacctgaagttcgtcgaaagcttcaaaaac
aagaccctcgaaaattttgacaactgggtggagaaattaatcaaggtctatttacagctg
accaatccaatgattctgggaatgtccaacaacgagcaagcaaagtctgcagatggcacg
gtaacccaaatcattggagttaatggagttaggactgcaggccttttgcaatcgcagcct
tccaagtcgcaacagctggataaagactcccatgtgaatgttcctcaaatcctcaacagc
tactacagtgccaagattgaagagtttagacaaaacattgacaagtaccagttgattctg
caagaagtagaaaattcaattagcgatctagacaaggtttcattaagtggaggcccggcc
atcggttcatacggtctcgatatgattgtcagcacattgaaggaagaattccagctttat
gtcgagctggccaatgagtttgcagaagtccaccatcaggttaaaaggctcgatgacggg
tcaatatag
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