Ogataea parapolymorpha: HPODL_03417
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Entry
HPODL_03417 CDS
T08137
Name
(RefSeq) Ribosome biogenesis ATPase RIX7
KO
K14571
ribosome biogenesis ATPase
Organism
opa
Ogataea parapolymorpha
Pathway
opa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
HPODL_03417
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
opa03009
]
HPODL_03417
Ribosome biogenesis [BR:
opa03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
HPODL_03417
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_16
AAA_5
AAA_14
AAA_33
TIP49
AAA_22
AAA_2
RNA_helicase
nSTAND3
ABC_tran
AAA_28
AAA_17
NPHP3_N
AAA_3
Rad17
Mg_chelatase
AAA_18
Vps4_C
NB-ARC
Cytidylate_kin2
AAA_25
IstB_IS21
Zeta_toxin
AAA_7
SKI
TsaE
NACHT
Viral_helicase1
Parvo_NS1
Sigma54_activat
Cytidylate_kin
DUF815
AAA_11
CPT
DUF5312
Motif
Other DBs
NCBI-GeneID:
25772857
NCBI-ProteinID:
XP_013935203
UniProt:
W1QEW6
LinkDB
All DBs
Position
IV:<701411..>703768
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AA seq
785 aa
AA seq
DB search
MNLLEEQTEIMRSKGITNGPLTMALAKDLTSLQIFEYVKLKDASFRRTKDDHLRYSIDRV
WKTVIADEEEEMKSMGIDPSTLKIKDEESEEQDNMMEVKDTNQANRSVVSLWKEENDVQA
SATETAEPDEKKAKKRSKDGSKHSKRPKVAKDRTPPTLTLSQLGGLDDVVSQLMEVVGMP
VLHPEIYMATGIEPPRGVLLHGPPGCGKTTIAYALAGELQVPFISISAPSVVSGMSGESE
KKVREIFDEAKQLAPCLVFFDEIDAITPKRDGGAQREMERRIVAQLLTSMDELSLDKTDG
KPVIIIGATNRPDSLDTALRRAGRFDREICINVPNEHARFKILESMVKNLRISGELDLLS
IAKMTPGFVGADLKALVTAAGISAIKRIFTSLSEEDEKKLLLEGVQLQQEENKEDGMELD
ENPEELLQKSNEQPQFSKLSIIQKFLIKHPTALTPEQLASLCIEHQDFVTALPQIQPSAK
REGFATIPDVTWSNVGALANVRVELHMAIVQPIKRPEIYEKVGITAPAGVLMWGPPGCGK
TLLAKAVANESKANFISVKGPELLNKYVGESERAVRQVFTRARASVPCIIFFDELDALVP
KRESSLSEASSRVVNTLLTELDGLNDRKGIFVIGATNRPDMIDPAMLRPGRLDKTLYIEL
PNASERLEILKTLIASNGTPLDSSVDLAVVAHDERCRNFSGADLSSLVREAGVIALKKKF
FTGISIGDESIEELHMDDDVVVTSDDFEKALDSVKPSVSDRDRLKYERLNQRMGWSQANV
VEQDK
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgctggaggagcaaactgagattatgaggtctaagggaataactaatgggccg
ttgaccatggcactagcgaaggacctgacgtcgctacaaatttttgaatatgtcaagctg
aaagacgcttctttcaggagaaccaaagacgatcatttgcggtattcgatcgatcgtgtg
tggaaaacggtgatagcggatgaggaagaggagatgaaaagtatgggtattgatccaagc
actttaaagatcaaggacgaagagtcagaagaacaagacaacatgatggaagtcaaggac
actaatcaagctaatagaagtgttgtgagtttatggaaagaggagaatgacgtccaggca
tctgccaccgaaactgcagagccagacgaaaaaaaagccaaaaaaaggtccaaggatggg
tccaagcactcgaaaagacctaaggtggctaaggatcgcactccgccaaccctcactctt
agccagcttggtggtctggatgacgtggtttcgcagctgatggaagtcgttggaatgcct
gttctccatccggagatctatatggctacaggaattgagcctccacgaggagttcttctc
catggtcctccgggatgtggaaaaaccaccattgcatatgcgcttgcaggtgagcttcaa
gttccgttcatatcgatcagtgcgccgtccgtggttagcggaatgtctggagagagcgag
aagaaggtcagagagatatttgacgaggccaagcaactagccccatgtttggtgtttttt
gatgaaatcgacgctattactcccaaaagagatggcggtgcacagcgtgagatggaacga
cggatcgtggctcaactgctcacttcgatggacgagctttcgcttgacaaaactgacgga
aagcctgtgattattattggcgccactaatcgcccagactccctagacacagcccttaga
agagcaggacgatttgatagagaaatttgcataaatgttccaaatgaacatgcgcggttc
aaaattctcgagagcatggtcaagaatttgagaatcagcggagagcttgatcttctttcg
atagccaagatgacaccagggtttgtgggtgcggatttgaaggcactggtgacggccgca
ggtatttctgccatcaagagaattttcacctccttgagcgaggaagacgagaaaaagctg
cttttggaaggggtgcaattgcaacaggaagagaacaaggaggatgggatggagctggac
gagaaccccgaagagcttctgcagaaaagcaacgagcaaccgcagtttagcaagctctct
ataattcaaaaattcctcatcaaacaccctacagcgctgactccagagcagctggcatct
ttgtgcatagaacaccaagatttcgtgacggccctgcctcaaatccaaccatccgcaaaa
agagaaggctttgccaccattccagatgtcacgtggtcgaacgtgggtgctttggcgaac
gtgcgggtggaactacacatggccattgtgcagcctatcaaacggcccgaaatatacgag
aaagttggtattacggcgccagcgggcgtgcttatgtggggtcctcctggttgcggtaaa
acactgctggctaaggccgtcgccaacgagtcgaaggccaatttcatttctgtcaaagga
ccagagcttctcaataaatacgttggtgagtccgagcgcgcggtcagacaggtgttcact
cgtgcaagagcttcagttccgtgtattatatttttcgacgaactggacgcattggtgcca
aaaagagagtcgtcactgagcgaggcgagctcgagagttgtcaacactctgctcaccgaa
ctggacggcctcaacgatagaaaaggtatttttgtcattggagccaccaacagaccagat
atgatcgatccagccatgctgcgtcccggaagacttgacaagacgctttatattgagctt
cctaatgcttctgagagactggaaattctcaagacattgatcgcctccaacggaacacct
ttggattccagcgtcgacttggccgtcgtggcgcacgacgagcggtgccgcaacttttct
ggtgccgatctctcgtcgttggtccgtgaggcaggtgttattgcattaaaaaagaagttt
tttaccggtatcagcattggagacgaatctattgaggaattacatatggacgatgacgtt
gtggtgacaagtgacgactttgaaaaggctttggatagcgtgaagccgtctgtgagtgac
agagaccgcctaaaatatgagcgtcttaatcagagaatgggatggagccaggccaacgtg
gtggagcaggacaagtaa
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