Ogataea parapolymorpha: HPODL_03434
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Entry
HPODL_03434 CDS
T08137
Name
(RefSeq) putative RNA-binding protein
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
opa
Ogataea parapolymorpha
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
opa03041
]
HPODL_03434
03036 Chromosome and associated proteins [BR:
opa03036
]
HPODL_03434
Spliceosome [BR:
opa03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
HPODL_03434
Chromosome and associated proteins [BR:
opa03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
HPODL_03434
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_PARP14_3
RRM_5
RRM_7
Suf
Motif
Other DBs
NCBI-GeneID:
25772874
NCBI-ProteinID:
XP_013935220
UniProt:
W1QDK4
LinkDB
All DBs
Position
IV:723139..725457
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AA seq
772 aa
AA seq
DB search
MSLQAQLQLHPTSFLLWRRLLEESPTEENYQLAYIRTQFDVTNNYKMWGLYYKHCTTKIH
DAANLDHLWLQQLQIPSLDYESLLNDYSRFVSDHFGEQYTDKMKNILQIKKKVTQILEKI
EPWEMRRQDKSPEYWIGYLKALHGSKVLDRVTKNRLIQCTVERSLSVQVFVPVVQTYLSF
NLEVDEFAFWERLVQIEPSNAEVWIQCIRDCPLDQFQKIRSQFNSYSDLNLIPVFCEILR
IELHLFKENPAVAQPLLIEDTYNYFSRALKAGDIFHTVAKLCIEIQEDIGDIDGVRDGFL
LPFLEAFDNQAEVWLYVTEFEKRHGNYRHVTDLFKKAMDIAEKLDWPERLAAEWKRFELL
KGTDDSQEYCDEVCKLALSRIKGQKRPFLESELEQKPEGPQNKKRAHEDTSETKPRKPKT
ETRDREHLTILVANLPSSIDEKGLTSIFSSCGKIRSITLLEGKATIEFTDEQGLLSAMKK
DGTIVEDSPIEVVHLKNNTLWVANYPPEKTAEDLKKIFGQHGGVLAVRLPSLKTNVQRRF
CYVEYSSEQDAASAVKALDGHTIHGKTGDFKLTVKISNPEARQERKGALEEGRQVYVSDL
DFYKVDEDKLSEIFSKYGDIEMIRIPVRRDEKSKKLNNGFAFISFRSSSDAVKSLELDGK
LLAGRPMKIELATPKKKKVSVLGTGKFDRARTISVLNVDDKINTETLKAIFEEIGPVTQI
ELQPENNAALIEFETVRSSGMADFKFNGRKIGDTTVRIGTFQDFLRLKRNKT
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgtcactacaggcccagctacaattgcacccgacgtcgtttttgctatggcggagattg
ctcgaggaaagtccaaccgaagaaaactaccagctggcatatatacgcacccagtttgat
gtgacaaacaactacaagatgtggggactctactataaacattgcacaactaagatccac
gacgctgcaaatcttgaccacctttggcttcaacagctgcaaataccgagtttggattac
gaaagccttctgaatgactactcaaggtttgtgtcagatcactttggagaacaatacaca
gacaaaatgaagaacatacttcaaataaagaaaaaagtgacacagatactagagaagatc
gagccctgggagatgcgaagacaggacaaaagtcctgaatactggattggctacttaaaa
gcattgcacggaagcaaagtgttggatagagtgacaaaaaaccgtttaatccagtgtaca
gtagaaagaagtttaagcgttcaggttttcgtaccagtggtacagacctatctgtcattc
aacttggaggtggatgagtttgctttttgggaaagacttgtgcaaattgagccatccaat
gcagaagtatggatccaatgcatccgtgactgtcctctggatcagtttcaaaaaatacga
tctcaattcaacagttactctgatctaaatttgatacctgtgttctgtgaaattctacga
atagaactacatctgttcaaagagaatcctgcggtggcgcaaccactgctgattgaggac
acatacaattatttttcaagagcattaaaagcaggggatatattccacactgtcgcaaaa
ttgtgtattgaaattcaggaggatattggagacattgatggcgtcagagatgggttttta
ctcccctttttggaggcttttgacaaccaagcggaagtgtggctttatgtcaccgagttt
gaaaagagacatggcaactatagacatgtgacggacctattcaaaaaagcaatggatatt
gccgaaaagctggattggcctgagcgtttagctgctgaatggaaaagatttgagctgctc
aaaggcacagatgatagccaagaatattgcgacgaagtttgcaaactcgcactctcacga
atcaaaggccagaaaagaccatttttggagtcagaactagaacaaaaaccagaagggccg
caaaacaaaaaaagagcgcacgaggacacttcggaaacaaagccaaggaaaccgaaaacc
gagaccagagatcgcgaacatctcactatattggtagctaatctgccctcttcaattgat
gagaaaggactgaccagtatattcagctcctgcggaaaaattcgtagcattaccttgttg
gaagggaaagcaaccattgaattcacagacgaacagggactcttatcagctatgaagaaa
gacggcacaatagttgaagactcgccgatagaggtggtccatttgaaaaataataccctc
tgggttgcaaattatcctcccgagaaaactgcggaagacttgaagaagatttttggacag
catggaggagtattggcagttagactgccatcgttgaaaaccaatgtgcaaaggcgtttt
tgctacgttgaatattcgtctgaacaggatgctgcgtctgctgtgaaagcattggatggc
catacgatacatgggaaaactggcgatttcaaattgacagtcaaaatctcgaaccctgaa
gccagacaagagcgcaaaggcgctctcgaagagggcagacaggtgtatgtcagtgacttg
gacttttataaggtcgatgaggataaattgagcgaaatattctccaaatatggtgatatt
gaaatgattcgcattcctgtgagacgtgatgaaaagagtaagaagctcaacaacgggttt
gcattcatttcgttcaggtccagttccgatgccgtcaagagtctcgaattggatggcaag
ttgctggctggaagaccaatgaaaatcgagttagctacgcccaagaaaaagaaagtgtct
gttcttggaacggggaaatttgatagagcccggacaatctcagtgctcaatgttgacgac
aagatcaacactgaaactctgaaagctatatttgaagaaataggcccagtcacccagata
gagttgcagcccgagaacaacgcggctttgattgaatttgagactgttagaagctctggt
atggcagatttcaagttcaacggccgcaagatcggtgacactactgttcgaattggcaca
tttcaagattttttgagactgaagagaaacaagacttaa
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