Ogataea parapolymorpha: HPODL_03449
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Entry
HPODL_03449 CDS
T08137
Name
(RefSeq) N-glycosylase/DNA lyase
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
opa
Ogataea parapolymorpha
Pathway
opa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HPODL_03449
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
opa03400
]
HPODL_03449
Enzymes [BR:
opa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HPODL_03449
DNA repair and recombination proteins [BR:
opa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HPODL_03449
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
25772889
NCBI-ProteinID:
XP_013935235
UniProt:
W1QDM0
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All DBs
Position
IV:748995..749947
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AA seq
305 aa
AA seq
DB search
MTKDIVWKAIRLSPKELSVARVLRCGQAFRWKYVDDIWSCTIQNRVLLLKQDDTFLHYAS
IPHLKDTEEVVLDYFNLSIRLEELYLDWASKDKHFTKNSANFAGIRMLRQDPWENLVSFI
CSTNNNVKRISKMCENLCIHYGEFLVEYQGIKHYKFPEPERLAQPNVEAELRALGFGYRA
KFIHQTAKMLTEKDEFAKLYSMRTEPHKTCHDYLQTFMGVGPKVADCVCLMSLDKHDVVP
VDTHVFKIATKTYRMPGKLLNKELYAQIQDKFKQLWGEYAGWAHSVLFAADLRDLNNGIN
IKTEK
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagacatcgtctggaaagccatccgcctctctccaaaggaactctcggttgcc
agagttttgcgctgcggacaagcgttccgctggaaatacgtggacgacatatggtcctgt
acgatccagaacagagtgctgcttctgaaacaggacgacacgttcctccactacgcatct
atcccgcacttgaaggacaccgaggaggtggtcttggactacttcaacctgtctatcagg
ctcgaagagctgtaccttgactgggcttccaaagataagcattttacgaaaaactctgca
aattttgccggaatacgcatgctcagacaagatccgtgggagaatcttgtgtcgtttatc
tgctcaaccaataacaacgtgaaacggatctcgaaaatgtgcgaaaatttgtgtattcac
tatggcgagtttttggttgagtatcaggggatcaaacactacaaattccctgaaccggag
cgtttggcccagccaaatgttgaggctgaactgcgtgcgcttggatttgggtatcgggca
aaattcattcatcaaaccgccaaaatgcttaccgagaaagacgagtttgcgaaactgtac
tcgatgagaacggaaccccataaaacgtgccacgactatctccagacgttcatgggcgtc
ggccctaaagttgctgactgtgtgtgtttgatgtcgttggataagcacgacgtcgttcct
gtcgacactcatgttttcaagattgctaccaaaacgtaccgcatgccaggaaaactacta
aataaagagctttacgcgcaaatccaagacaaattcaagcaactatggggtgagtacgct
ggctgggctcactcggtgctttttgctgctgatctgcgggatctgaacaacgggatcaat
ataaaaacggaaaaatag
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