Ogataea parapolymorpha: HPODL_03554 Help Entry HPODL_03554       CDS       T08137                                  Name (RefSeq) hypothetical protein   KO K10706   ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] Organism opa  Ogataea parapolymorpha Brite KEGG Orthology (KO) [BR:opa00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:opa03021]     HPODL_03554 Enzymes [BR:opa01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      HPODL_03554     5.6.2.5  RNA 5'-3' helicase      HPODL_03554 Transcription machinery [BR:opa03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      HPODL_03554 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SEN1_N AAA_11 AAA_12 SEN1_barrel AAA_19 AAA_30 UvrD-helicase ZapB AAA_25 ResIII Motif Other DBs NCBI-GeneID:  25772992 NCBI-ProteinID:  XP_013935350 UniProt:  W1QDY7 LinkDB All DBs Position IV:946958..952624 Genome browser AA seq 1888 aa AA seqDB search MSHLIDLIESSHNSPSDDAVQQHVFNECYQYFASLDTEHYFCDTTTARIACYLLVICIAF EDSDILRTLKTAARKSLDHCPKCILGFHEARAAARNDLLLKRNLPYDKIAIVIQRVFDWE AQSLVDKLGTLKFDRDEDLLHSPDVHNTLTECLVCPQLLRANDQLRTLCSHMLAVVTQRQ PIRPKIDLFAGLLYFLFEGSDTERAWALSCLPAQLRPASFTASFMEEYERHFFNIQNPAL FSADACALFWANIVPLLQLGNGECVLRLNWPAAARNFEKTAPFKVVPLVRIFVNEIMSYL DEPLPLLLRAFSVLLTKLGAEFWEHVQPHSYLNFFDVSFNSPHYSKHLDTLRLANAAPGA RTPCLEDLVNWIYPLYRSVTPSQKTQTACIVYKYFLDKLGRPHCGALLVCVGADLITDEI RLQNPLFDAKLTVELYSKSDARALIDRKAITLFDAMADPQVKIKALGVVAASLVYDVASL AQASHFLAKYDASTVSAVNMDLWILLSRKLAADDRTFAQQVLCSLSEASYVFSLDITLLK ITFRDARDFSDEKLRELVAACSKQNKSVAMFASSVEAIFSRMADFFSGQTLRQILTDLAA SIGVWKCLCSCEEKLYESAVGLLYEAFDVDGRLEAVRELLRMDTAVTVEAAKDAFVSLTR LEQFNASRRGVRVLMDLVQCLLDPIDGVLIDTARLSNATRAILAQFWAQCWRFLTMIYVK TFDWSKEYEKVKAHVQNAQHNEKITRTLMDFTRDVLEVSQTLLGGYKLLVESMQFAGVSA EQSREIQQSLIQPVLQAFERTVYWLRLSDSALLFLCVRLTLDTLDLVAEMGLEFTHTSLA ILAKLCAKARKFNNKLSEEQRGEILVRVRRFNNTLVEEVLAEAEARSEPRESRERSERST PEEQSPSVSSATVRAPKQSTLANFLTKPAPEEPPAPKRLSMLEQARLQLAEKRRQEPLRQ EPAPPRPAGFNRRSKTSDAESSTSESESEDENGLFTREQVVAKMKKTKAALQSLQPRAKN LAVRPSGGAARGVDLKKKAEELMRLRLNVDMNPLYKEILTWSYFRDGDYPDDDQSKYTSV KNRFASADEYQQTFRPLLLLECWQSIQRAKETAQETPFRVTVGSRAATDTFYDVFASTRR EVVTEQRCVGDSDLVVLMYVENLDSDSKLTRKHLAGCRHACLGRVKDIKNNSNGFSDLTV RVATKTNMNPYLSPGMELVCMKVVQMTTIEREFSSLQGLKYYDLGREIVTATPSVPGKID PVVVGRMKQTYAVNDSQARAIAGTVHKDGFSLIQGPPGTGKTKTILGIIGCALTSGNPNA IAVPGEQKVSSKRRILICAPSNAAVDELVLRLMGGIKSARGDNYRPKVVRLGRSDAVNAQ VKETTLEELVDAQLSAVDTAADDTKIREEHRKCVHERDELRQKLAAGNVSADEVARLELR LQEVVQKRKELGRRLDELREQNSVKHRNREIERRNAQFRILSSAEVVCSTLSGSAHDVLA GMSFTFDTVVIDEAAQCIELSAIIPLRYGAKRCIMVGDPNQLPPTVLSQKAASFNYEQSL FVRMQNNHDNAVYLLNVQYRMHPEISKFPSKEFYDSKLLDGSGMAEKTARPWHAIQEYGP YRFFNIEGSHQQNEQTKSLYNYAEAKIALEIVSDLFALFPDEQWPGKIGIISPYKEQIRC IREVFVQKFGFPITKEIDFNTVDGFQGQEKDIVLFSCVRAGEQNSGVGFLGDVRRMNVAL TRARSSLWVLGSRETLMSNKTWRDLIDDLYERGLVTRAYPGFTRKKGGLGDNYEPKRKKH KADTRAEPKKQKLGVMSYSSLSNANKDRAQPKKTPTPNPPKPAPPPPPASLPKIPAVARQ SAAPVGPSGEQLIKISKPKPKFPRPKRN NT seq 5667 nt NT seq  +upstreamnt  +downstreamnt atgtcgcacctcatagacctcatcgagagctcgcacaacagtcccagcgacgacgccgtc cagcagcacgtcttcaacgagtgctaccagtattttgcgtcgctggacaccgagcactac ttctgcgacaccaccacggcgcgcattgcatgctacttgctcgtcatctgcatagcgttc gaggactcggacattctgcgcacgctcaagacggcggcgcgcaagtcgctcgaccactgc ccgaaatgcatcctcggcttccacgaggcacgtgccgctgcgcgaaatgaccttctgctc aagcgcaatctgccctacgacaaaatcgccatagtgatccagcgggtgttcgactgggag gcccaatcgctggtcgacaagctcggcacgctcaaatttgaccgcgacgaagacctgctg cacagccccgatgtgcacaataccctgactgagtgtctggtgtgtccgcagcttctgcgt gccaacgaccagctgcgcacgctgtgctcgcacatgctggccgtggtgacccagagacag ccgatccggccgaaaatcgacctcttcgccgggctgctctattttctgttcgaaggctcc gacacagagcgcgcgtgggcgctctcgtgcttgcccgcgcagctgcggcccgccagcttc acggcgtcgtttatggaggagtacgagcgccatttcttcaacatccaaaacccggcgctc ttcagtgcggacgcctgtgcgcttttctgggccaacatcgtgcccctgctgcagcttggg aacggcgagtgcgtactgcggctgaactggcccgcagcggctcgcaactttgaaaaaaca gcaccgtttaaagtggtgcccctcgtgcgcatctttgtcaacgaaatcatgtcgtacctg gacgagccgctgccgctgctgctgcgtgcgttttccgtgctgctcacgaagctgggagcc gagttttgggagcacgtgcagccgcatagctacctcaacttttttgacgtttcgttcaat agcccgcattatagcaaacacctagacacgctgcggcttgcaaatgcggcgccgggcgcg cgcacgccttgtctagaagaccttgtcaactggatctacccgctgtaccggtctgttacg ccgtcgcaaaagacacagacggcgtgcatcgtgtacaaatatttcttggacaagttgggg cggccgcactgcggcgcgctgctggtttgcgtgggggcagatttaatcaccgacgagatc cggctgcagaacccgctgttcgacgccaagctgacggtcgagctgtacagcaagtcggat gcgcgcgcgctgatcgaccgcaaagccatcacgctgttcgacgcaatggcggacccgcag gtaaagatcaaggcgctgggcgtggtggcggcgtcgctcgtgtacgacgtggcgtcgctg gcgcaggcgagccattttttggccaaatacgacgccagcacggtctcggcggtgaacatg gacttatggatcttgctgtcgcgcaaactggccgcagacgatagaacgtttgcgcaacaa gtgctgtgcagcttaagcgaggccagctatgtgttctcgctcgacatcacgttgctcaag atcacgttccgcgatgcacgtgacttttccgacgagaagctgcgggagctggtggcggcg tgcagcaagcagaacaagagcgtggcgatgtttgcgagcagcgtcgaggcgatattcagc cgcatggcggatttcttcagcggccagactctgcggcagatcctgaccgacctcgccgcg tcgatcggcgtctggaagtgtctgtgctcgtgcgaggaaaaactgtacgagagcgctgtc gggctgctgtacgaggcgttcgacgtggacggccggctcgaggcggtgcgcgagctgctg cgtatggacacagccgtcaccgttgaggctgccaaggacgcatttgtgagtctgacgcgg ctggagcagtttaacgccagcaggcgcggtgtgcgtgtgctcatggacctcgtgcagtgt ctgctggatccgatcgacggtgtgctgattgacacggcgcggctgagcaacgccacgcgc gccattctcgcgcagttctgggcgcaatgctggcggtttctcaccatgatctacgtcaag acgtttgactggtccaaggagtacgaaaaggtcaaggctcacgtccaaaatgcgcagcac aacgagaaaatcaccaggacgctgatggacttcacgcgtgacgtgctggaggtctcgcag acgctgctcggcgggtacaagttgctggtggagtcgatgcagtttgcgggtgtctctgcc gagcagagccgcgagatccagcagagtctgattcagcccgtgctgcaggcgttcgagcgc actgtgtactggctgcggctgagcgacagcgcgctgctgtttctgtgcgtgcggctgacg ctggacacgctagacctggtggcggagatggggctggagttcacgcacacgtcgctggcg atcctggcaaagctgtgcgcgaaagcgcgcaagttcaataataagctgtcggaggagcag cgcggcgagattctcgtgcgcgtgcggcggttcaacaatacgctagtcgaggaggtgttg gccgaagcggaagcgcgtagcgagcctcgcgaatcccgcgaacgaagcgagcggtcaacg ccggaagaacagtcacctagcgtttccagcgccactgtccgggcaccaaaacagtcgacc cttgccaacttcctcaccaaaccggcccctgaagaaccacccgcccccaaacgcctgtcc atgctcgagcaggcaaggctgcagctggccgagaagcggcgccaggagcccctgcgccag gagccggcgccgccacgcccggccggctttaacagacgctccaaaacgtctgatgccgag tcatccacgtccgagtccgagtccgaggacgaaaacggtcttttcacaagggagcaggta gtggccaagatgaagaaaactaaagccgcgctgcaatctctgcagccacgcgccaaaaac ctggcggtgcggccgagcggcggtgcggctcgaggtgtcgacctgaagaagaaagcagag gagctgatgcggctgcgactgaacgtggacatgaacccgctatacaaggagattcttacg tggtcgtacttccgcgatggtgattaccccgatgacgaccagagcaagtataccagcgtt aaaaaccggtttgcgagcgcagacgagtaccagcagacgttccggccgctgttgctgctg gagtgctggcagtcgatccagcgggccaaggagacggcacaggagacgccgttccgggtg acagtgggctcgcgtgcggccaccgacactttttacgatgtttttgcgtcgacgcggcgc gaagtggtgacggagcagcgctgtgtcggtgacagcgacctggtggtgctcatgtacgtg gagaatctggatagcgactcgaaactgacgcgaaagcatctggccgggtgtcgccacgcg tgtttgggccgtgtgaaagacatcaagaacaacagcaacgggttttccgacctgacggtc cgcgtggccacgaaaacaaacatgaatccatacttgagtcctggcatggagctggtgtgc atgaaagttgtgcagatgacgacgattgagcgggaattctcttcgttgcaagggctgaag tactacgatcttggacgggagatagtgacggcaacgccgagcgtgccgggcaagatcgat cctgtggtggtgggccggatgaagcagacgtatgcggtgaatgactctcaggcgcgggca atcgcgggaaccgtgcacaaggacggattttcgttgatccagggtccaccgggcacgggt aagaccaagacgattttggggattattgggtgtgcgctcacttcgggcaacccgaacgcg atcgcggtgccgggcgagcagaaggtgtcttcgaagcgacggatcctgatctgcgcgccg tcgaacgcggccgtggatgagctcgtgctgcggctgatgggcggcatcaaaagcgcgcgt ggagataactaccggcctaaggtggtgaggctgggccgttcggacgcagtgaacgcgcag gtgaaggagacaacactggaggagcttgtggacgcgcaactgagcgccgtcgatactgcc gccgacgacaccaagatccgcgaggaacaccgcaagtgcgtgcacgagcgcgacgagctg agacagaaacttgcagcgggcaacgtgtcggcggacgaggtggcgcggctcgagctgcgg ctgcaggaggtggtgcagaagcggaaagagctcggtcgccggctcgacgagctgcgcgag cagaactccgtcaagcacagaaacagagagatcgagcgccgcaacgcgcagttccgcatt ctcagctccgccgaggttgtgtgctccacgctctcgggctctgcccacgacgtgctcgcc ggcatgtcgttcaccttcgacactgtcgtcatcgacgaggccgcgcagtgcatcgagctc agtgccataatccccctgcggtacggcgccaagcgctgcatcatggtcggcgaccccaac cagctgccgccgaccgtgctgtcacagaaagcagccagcttcaactacgagcagagtctt tttgtgcgtatgcagaataaccacgacaatgcggtgtacctgctgaacgtacaataccgt atgcacccggaaatttccaaattcccatccaaagaattctacgactccaagctgctggac ggctccggcatggcagaaaaaaccgcacggccgtggcacgcaatccaggagtacgggcct taccggttcttcaacatcgagggcagccaccaacagaatgagcagaccaagtcgctgtac aactacgccgaggctaagatcgcgctcgagatcgtgtcggacctgtttgcgctgttccct gacgaacagtggccgggaaaaatcggcatcatttcgccgtacaaggagcagatcagatgc atccgcgaggtgtttgtgcagaagttcgggttcccgatcaccaaggaaatcgatttcaac accgtggacgggttccagggccaggaaaaggacattgtgctgttttcgtgtgtgcgtgcc ggggagcagaactcgggcgttgggtttttgggagacgtgcgccgcatgaacgtcgccttg accagagcgcgctcctcgttgtgggttcttggaagccgagaaaccctcatgtccaataaa acatggcgcgaccttattgacgacctgtacgagcgcggtcttgtgaccagagcatatccg ggctttacaaggaagaagggcggtttgggcgacaactacgagccgaaacgcaagaaacat aaagccgacacgcgcgccgagccaaaaaaacagaaactgggcgtcatgagctactcgtct ttgagtaacgcaaataaggatcgggcccagccgaaaaagacgccaacaccaaatccaccg aaaccggcaccgccgccgccgcccgccagtctgcccaaaatccccgccgttgcgcgccaa agtgcagcccctgtgggcccgtccggggaacagctgatcaagatcagcaagccgaaacca aagtttccccggcctaaacgtaattag

DBGET integrated database retrieval system