Ogataea parapolymorpha: HPODL_03600
Help
Entry
HPODL_03600 CDS
T08137
Name
(RefSeq) Replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
opa
Ogataea parapolymorpha
Pathway
opa03030
DNA replication
opa03410
Base excision repair
opa03420
Nucleotide excision repair
opa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HPODL_03600
03410 Base excision repair
HPODL_03600
03420 Nucleotide excision repair
HPODL_03600
03430 Mismatch repair
HPODL_03600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
opa03032
]
HPODL_03600
03036 Chromosome and associated proteins [BR:
opa03036
]
HPODL_03600
03400 DNA repair and recombination proteins [BR:
opa03400
]
HPODL_03600
DNA replication proteins [BR:
opa03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
HPODL_03600
DNA Replication Termination Factors
ELG1-RFC complex
HPODL_03600
Chromosome and associated proteins [BR:
opa03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
HPODL_03600
DNA repair and recombination proteins [BR:
opa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
HPODL_03600
Check point factors
HRAD17(Rad24)-RFC complex
HPODL_03600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Rep_fac_C
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
RuvB_N
AAA_22
AAA_11
AAA_assoc_2
Mg_chelatase
AAA_16
AAA_14
AAA_19
AAA_24
DUF815
AAA_7
DNA_pol3_gamma3
AAA_28
ResIII
AAA_30
AAA_5
SLFN-g3_helicase
VHL_C
bpMoxR
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
25773036
NCBI-ProteinID:
XP_013935401
UniProt:
W1QE62
LinkDB
All DBs
Position
IV:1017029..1018110
Genome browser
AA seq
346 aa
AA seq
DB search
MSDQKERMPWVEKYRPKTLDEITSQSHAVQVLKRNLQTANLPHMLFYGPPGTGKTSTILA
MAKELYGPHLFRSRVLELNASDERGISIVRDKIKNFARLSISNPSKEDLEKYPCPPYKLL
ILDEADSMTSDAQSALRRTMETYSGITRFCLICNYITRIIDPLASRCSKFRFKMLDEENS
IKRLQYICNEENVTASTPVLKEILRISDGDLRKAINFLQSVHKMLMPAEDEMADDVTEDQ
IRDVFGYLPKDQLMELIRLAEKKDMDRIFEFVTDYISKEGYNATLIISSLHDVLLLGDDS
GISLSLDGKQKNSISRILFETDARLSHGCDETIQILDCVLRISTVL
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaccaaaaggagagaatgccttgggtcgagaaatatcggcccaaaactctggat
gaaatcacctctcaaagccatgctgttcaggtcctcaagcggaacttgcaaactgccaat
cttcctcacatgctgttctacggtcccccaggaactggaaagacgtcgacaattttggca
atggccaaagagctttacggcccgcaccttttcaggagcagagtgctcgaactgaacgct
tctgacgaacgtggaatatcgattgtcagagataaaatcaagaactttgcgagattgtcg
atctccaatccctctaaagaggacctagaaaagtacccatgtcctccatataaactgctg
attctcgacgaagccgattcgatgacatctgatgcgcaaagcgcgctcagaagaaccatg
gagacatactcaggaatcacacgtttttgcctgatttgcaactacatcacccgtataata
gatccgcttgcctcgcggtgttccaagtttagattcaagatgctggatgaggaaaattcc
atcaaaagattgcaatatatttgcaatgaggaaaatgtgactgctagcactcctgtgctc
aaggaaattctaaggatcagtgacggagacttaagaaaggccatcaatttcctccaaagt
gtgcacaagatgctgatgcctgccgaggacgaaatggctgacgacgtcaccgaagaccag
atcagggacgtttttggctacctgccaaaagatcagctcatggagctaatcagactcgcc
gagaagaaagacatggaccgtatctttgagtttgttaccgattacatctccaaagaaggg
tacaatgccactttaataatcagctctctgcatgatgtgctgcttctgggcgacgacagt
ggtatttcgctgagcctggacggaaaacagaaaaacagcatctcgagaattctctttgag
acggacgccagacttagtcacggatgtgatgagacaatacaaattctcgattgtgtacta
cgaatctctacagttttgtga
DBGET
integrated database retrieval system
