Ogataea parapolymorpha: HPODL_03654
Help
Entry
HPODL_03654 CDS
T08137
Name
(RefSeq) GTP-binding protein ypt5
KO
K07889
Ras-related protein Rab-5C
Organism
opa
Ogataea parapolymorpha
Pathway
opa04144
Endocytosis
opa04145
Phagosome
opa04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
HPODL_03654
04145 Phagosome
HPODL_03654
04148 Efferocytosis
HPODL_03654
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
opa04131
]
HPODL_03654
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
opa04147
]
HPODL_03654
04031 GTP-binding proteins [BR:
opa04031
]
HPODL_03654
Membrane trafficking [BR:
opa04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
HPODL_03654
Endosome - Lysosome transport
HPODL_03654
Exosome [BR:
opa04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HPODL_03654
Exosomal proteins of other body fluids (saliva and urine)
HPODL_03654
Exosomal proteins of colorectal cancer cells
HPODL_03654
Exosomal proteins of bladder cancer cells
HPODL_03654
GTP-binding proteins [BR:
opa04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
HPODL_03654
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
Gtr1_RagA
MMR_HSR1
RsgA_GTPase
GTP_EFTU
G-alpha
SRPRB
Septin
TniB
AAA_16
Motif
Other DBs
NCBI-GeneID:
25773090
NCBI-ProteinID:
XP_013935455
UniProt:
W1QE89
LinkDB
All DBs
Position
IV:complement(1103868..1104541)
Genome browser
AA seq
212 aa
AA seq
DB search
MSSNTATEHGQSAMRFAQFKLVLLGESAVGKSSIVHRFVKDSFTDSRESTIGAAFLTQTI
QIDANTTVKFEIWDTAGQERYRSLASMYYRNAQAALVVFDITQESSLDKAKYWIKELQKQ
ASSGIVIALVGNKLDLEEERKISKDEAQAFANELGLMYAEVSAKTGEKVKDCFKDIALKL
PLEEKLSQQGQRRRRTVDLNQRPSTNEQQCAC
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctaacacagcgacggaacacggccagtccgccatgaggtttgcacaatttaag
cttgtcttgctaggcgaatctgcggtgggaaaatcctctattgtccacagatttgtgaaa
gactcttttacagactcgcgggagtctaccatcggcgcagcttttcttacccaaaccatc
cagattgacgctaatacgaccgtcaagttcgagatatgggacactgcaggccaggaaaga
tacagatcactcgcctctatgtattacagaaacgcacaagcagcgctggttgtttttgat
atcacacaggaatcgtcgctcgacaaggctaagtactggatcaaagaacttcagaaacaa
gcaagttcaggcattgtgatcgccctggtaggaaataaacttgatttggaggaggagcga
aaaatcagcaaagatgaggcccaggcctttgccaacgaactgggactcatgtatgcagag
gtcagtgctaaaacgggggagaaggtgaaggattgcttcaaagacattgccttgaaattg
ccactggaggaaaagctgagccagcagggccagcgcagaagacgcacagtagacctgaat
cagagaccttctacgaacgagcagcaatgtgcctgctag
DBGET
integrated database retrieval system