Ogataea parapolymorpha: HPODL_03753
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Entry
HPODL_03753 CDS
T08137
Name
(RefSeq) TFIIF (Transcription Factor II) largest subunit
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
opa
Ogataea parapolymorpha
Pathway
opa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HPODL_03753
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
opa03021
]
HPODL_03753
Transcription machinery [BR:
opa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
HPODL_03753
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
GYF_2
Vac7
Motif
Other DBs
NCBI-GeneID:
25773187
NCBI-ProteinID:
XP_013935558
UniProt:
W1QFY0
LinkDB
All DBs
Position
IV:complement(1264987..1266606)
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AA seq
539 aa
AA seq
DB search
MSNIKSEGSTRYEYFPLRACTEKDIEDTHYHILKFHSVKKVNPQKDFEEPARLHRKDPKN
LQFQLSLKELEQRRIEERKNELLKEQKKRELLAQQGIKTEELPTVILDDDVDWSKLPEAE
RRWREEERQRREEEAAREAKRELEMSVVAPDGGARQSRRPFFKRKTRQVKVFDDNKRKLR
YEEYYPWVLEDYDAKQAWIGNYEAGNTDNYCLLMLDNQNKCFKMIPVEKFYKFTPRNKYA
TLTLEEAEAKMKENSQTSRWIMRKMQDEVERGERVDFRYRKMRATSQRAEDVKRSDDETL
DFDDEFQDDEEAPILEGNEEESKLVEKKIKSEQLRANNLIEKDEGDDLDDLFETRKIDKE
GKKLRRALAKNAMNEVYDTDDEEDPYLSESEMEEVETQQSADAKIKQEETGELPVISIRR
TTPQIKVKSYRDGFVVLKASKEVLSEFPAGEWNPKTAIKRSMSPESVSPKKIKVKLEGDS
GPITKADVDALVANGPIPLQTLVRQLKHKVSLDPNYKDELKRILRENFIVKDKMVMKRG
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacatcaaatccgagggcagtactaggtacgagtatttcccgctgcgtgcgtgc
accgagaaggacattgaggatactcattaccatattttgaagttccactcggtgaagaaa
gtgaacccgcagaaggactttgaggagcccgcaagactacacagaaaagatcccaagaac
ctgcagttccaactgtccttgaaggagctggagcaaaggcgaatcgaggagcgcaaaaat
gagctgctaaaggaacagaaaaagcgggaattgcttgcgcagcagggtatcaagacagag
gaactgccaacggtgattttggacgacgacgtcgactggtcgaaattgcctgaggcggag
cgtcggtggagggaggaagagcgtcagcgtcgcgaagaggaggccgctagagaggccaag
cgagaactggagatgtctgtggtggcgccagacggaggagctcgtcaaagcagacggcca
tttttcaagcgcaagacgagacaggtcaaggtgtttgacgacaacaagaggaagctgcgg
tacgaggaatattatccgtgggttctggaggactatgatgccaaacaagcgtggatcgga
aattatgaggcaggaaatacagataattactgtctgttgatgctggacaaccaaaacaag
tgtttcaagatgattccggtggaaaagttctacaaattcacgccgcgcaacaagtacgct
acgctgacgttggaggaggctgaagccaagatgaaggaaaacagccagacttccagatgg
attatgagaaagatgcaggacgaggtcgagaggggagagcgggtcgatttccggtacagg
aaaatgagagccacttcacagcgggctgaggacgtgaaacggtcggatgacgaaactctg
gattttgatgacgagttccaggacgacgaggaagctccgattcttgaaggtaatgaggag
gaaagcaagcttgtggagaaaaaaatcaagagtgaacagcttcgtgctaacaacctgatt
gaaaaagacgagggcgacgatttggacgatttgtttgagacgcgaaagatcgacaaggaa
ggcaagaagttgagaagagctctggcaaagaacgccatgaacgaagtgtacgatacagac
gacgaggaagacccgtatctttcagaaagtgagatggaggaggttgaaacgcagcagtct
gcagacgcaaagatcaaacaggaggaaacaggagaattacctgtaatttcgatccgcaga
acaacaccgcagatcaaagtcaagtcttatcgcgacggatttgtggttttgaaggcaagt
aaggaggttttgagtgagttcccggcaggcgagtggaaccctaaaacagcaatcaagcgt
tccatgtcgcctgagagcgtgtccccgaagaagatcaaggtcaagcttgagggtgattcg
ggacctatcaccaaggcagacgtggatgcactggttgctaatggtccgatcccgctccag
acacttgtcagacagctcaagcacaaggttagtctggatccaaactataaggacgaattg
aagagaattctgagagagaacttcattgtcaaggataagatggtgatgaagcgaggataa
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integrated database retrieval system
