Ogataea parapolymorpha: HPODL_03792
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Entry
HPODL_03792 CDS
T08137
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
opa
Ogataea parapolymorpha
Pathway
opa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
HPODL_03792
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
opa03041
]
HPODL_03792
Spliceosome [BR:
opa03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
HPODL_03792
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
HECT_2
CBM_26
Motif
Other DBs
NCBI-GeneID:
25773226
NCBI-ProteinID:
XP_013934028
UniProt:
W1QC29
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All DBs
Position
V:complement(<38467..>39744)
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AA seq
425 aa
AA seq
DB search
MSKRKIQDSPVEDTERKKISTRDRSLYLDTINRKILDFDYEKVCCISLSSTNIYGCLVCN
KYFRGRSMDSECFLHSINDDHHVFVNFDTLSFHILPENYQLDEQTASSLDDIRQQINPTY
KDLKDIYHDTSLKRDLAGREYRPGFIGLSNFGANDYSNVILQVLAHVPPLRDYLLLYPEK
LHKTKLVGKLSLLVRKMYSPNLFKSHLSAHELMQYVSSSTNKRFSLHHESEPKDFLMWLF
NSMHKELVSELQNNLISSIFQGKVELPSGKSKFWMLTLTLPSVTLFKDGAKLEIPQVALE
DLLAAKKYKIAKAPQFLTLYIKRKDDTQKIAGVNGSNINPTVVKFNPLQLKVDTHVYKLI
ANVVYSSGQNENYSLESENQAHYKIQVLDEVRNEWLEIDDLKVKPIEKDLLFLNQTYLQF
WQKIA
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcgaaaaatacaagatagtccagtggaggatacggagcgaaagaaaatctcg
actcgagacaggtcgctgtacttggacacaatcaacaggaaaatcctcgatttcgactat
gaaaaagtctgttgcatctcgctatccagcaccaacatctacggctgtctggtgtgcaac
aaatacttcagaggtcggtcaatggactcagaatgctttctacactcgataaacgacgac
caccacgtttttgtcaattttgacactctctcgttccatatcctgcccgagaactaccaa
ttggacgagcagaccgcttcttctttggacgacattcgacagcaaatcaacccgacatac
aaggacctaaaagacatatatcacgacacgtcactcaaacgcgatcttgctggccgagag
taccgtcctgggttcattggactgagcaattttggcgcaaacgactactcgaacgtaatt
ttgcaggtcctggcacacgttcctccattgagagactatctgctgctataccctgaaaaa
ctccacaaaaccaagctggtgggcaagctttcccttctagtgcgaaagatgtattctcca
aacctgttcaaatctcacctttctgcccatgaactaatgcaatacgtatcctcgtcgact
aataagagattttcccttcatcacgaaagcgagcccaaggacttcctcatgtggctgttc
aacagcatgcacaaagaattggtttcagaacttcaaaataatctgatctcgtcgattttt
caggggaaagtggaacttccatctggaaagtctaaattttggatgctcacattaacactg
ccatcggtgactttgtttaaagatggcgccaagctagagattccccaggtggcgcttgaa
gacctcttggcggcgaaaaagtataaaatagccaaagcaccgcagttcctgactctgtac
attaaaagaaaggacgacacacagaaaatcgcaggcgtgaacggatccaacatcaatcca
acggtggtgaaattcaatccgttgcaactgaaagttgacacccatgtctataagctcata
gccaacgtggtgtatagtagcggccagaacgaaaattacagcctggagagcgagaaccag
gctcactacaaaatacaagttctagatgaggtgcgcaacgagtggctcgagatcgatgat
ctcaaagtgaagccgatcgaaaaagacctcctattcctcaaccagacatacttgcaattt
tggcaaaagatagcatag
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