Ogataea parapolymorpha: HPODL_03798
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Entry
HPODL_03798 CDS
T08137
Name
(RefSeq) Nucleoporin NUP2
KO
K18722
nucleoporin NUP2
Organism
opa
Ogataea parapolymorpha
Pathway
opa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
HPODL_03798
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
opa03019
]
HPODL_03798
Messenger RNA biogenesis [BR:
opa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
HPODL_03798
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ran_BP1
NUP50
Motif
Other DBs
NCBI-GeneID:
25773232
NCBI-ProteinID:
XP_013934034
UniProt:
W1QAU1
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Position
V:complement(49332..51050)
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AA seq
572 aa
AA seq
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MAKRSKSQLTADAALAEDYDSDEEVFEGAKRASADVMASRPIAKLKPRLKAVNGSKPEPK
VGGAFGFLGASATEQSSKPANPFAFSKSTEEVINDQPTQLKSLNALFLEAVNNAIQKNPI
ADLRPILSKYNEYYDKVVNNKIAVKKAEVPKVDVKVAEVKNPQFKFGDSKPAESEEEEEK
PVEIKGPAFKLDTLPKSKNYGFKFGQAPPPDSDSDDDVKIEGPKFQLAGGTQIKDDVFKL
PKKEEKEKKEDKPAFTFGQTETKETPKFSFGQTPAPAFSFGSQPEPAEKQEKQEKSKTPA
ETPAFSFSDKPAFSFNVPKETKEEQKPEQKPEQKSEQKSEQKPAFSFGSSAFSFTKPSET
KPADSEPAKPAFSFSAPSNGFNFSSQPAQKPAVSNPFNFASKSQDTAPAASTFNFNFSAP
KPEENKDDAANDDDEVQNEDVKGDFAVVKLTQKVDTKTGEENETVLYTKKSKVLKFDAAD
KSDPYKSIGLGELKVLKNTETGKSRILVRSEGSMNVLLNVAILKDVKYELIGKGNSMRIP
TFSPDGKLETYIARVKTADDGKNLLEKVQSCQ
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaagaagcaaatctcagctcacggcagacgcagctcttgccgaagactacgac
agcgacgaggaagtgttcgagggagccaagcgtgcttctgcggacgtgatggcctcgcgg
cccattgccaagttgaagccgcggctcaaggctgtgaacggctccaagccggagcccaaa
gttggcggagcttttgggttcctcggggcctccgccacggaacaatctagtaaaccagcc
aatccgtttgcattctcaaagtccacagaggaggtcatcaacgaccagcctacacagtta
aaatccttgaatgctctgtttttggaggccgtcaacaacgctattcagaagaaccctatt
gcagacttgcgtcccattttatccaagtacaatgagtattacgacaaggtggtgaataat
aaaattgccgtgaaaaaggcagaggtgccgaaggtagatgtgaaggtggccgaggtgaag
aacccccagttcaagtttggtgatagcaagcctgcagaatccgaggaagaggaggaaaaa
ccggtggaaataaaaggaccagcgttcaagctggatacgctgcctaaatcaaagaattac
gggttcaagttcggccaggccccgcctccggactcggactcggatgacgacgtcaagata
gaaggcccaaagttccagctcgctggcggcacacagatcaaagatgatgtgtttaagctg
ccaaagaaagaggagaaggagaaaaaggaggataagccagcatttacgtttggccagaca
gagaccaaagagactcctaagttttcgttcggtcagacgcccgccccggccttctcgttt
ggcagccagcccgagccggctgaaaagcaagaaaagcaggaaaagtcaaaaacaccagca
gaaacaccagcattctcgttttcggacaaaccagcattctcgttcaacgttccaaaggag
acaaaagaagagcagaagccggagcaaaagccggagcagaagtcggagcagaagtcggag
caaaaacctgcattttcgtttggctcttctgccttctccttcaccaagccctccgagacc
aagccagccgactctgagccggccaaaccagctttctcgttctccgccccttctaacggg
ttcaacttctcgtcgcagcccgcacaaaagcctgccgtgtccaatccgttcaattttgca
tccaagtcacaggacactgctcctgctgcctcgacgttcaacttcaacttttctgcgcca
aaaccagaagagaacaaggacgacgctgccaacgacgacgacgaggtgcagaatgaagac
gttaagggtgactttgccgttgtcaagctaacacagaaggtggacacgaaaaccggcgag
gaaaacgagacggttttgtacacgaaaaaatccaaggtgctcaagttcgacgcggctgac
aagtcggatccgtacaagtcgatcgggctgggcgagctcaaggtgctcaagaacacagag
acgggcaagtcgcggattctggtgcggtccgagggcagcatgaacgtgctgctgaacgtg
gctattttgaaggacgtcaagtacgagctgatcggtaagggcaattccatgcggatccct
acgttctcgcccgacggtaagctcgagacgtatatcgcgcgcgtcaagacggccgacgac
ggcaagaatctgctcgaaaaagtgcaaagctgccagtga
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