Ogataea parapolymorpha: HPODL_03837
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Entry
HPODL_03837 CDS
T08137
Name
(RefSeq) U1 small nuclear ribonucleoprotein
KO
K11093
U1 small nuclear ribonucleoprotein 70kDa
Organism
opa
Ogataea parapolymorpha
Pathway
opa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
HPODL_03837
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
opa03041
]
HPODL_03837
Spliceosome [BR:
opa03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
HPODL_03837
Complex B
HPODL_03837
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U1snRNP70_N
RRM_1
RRM_7
Sipho_Gp157
RRM_Nup35
Nup35_RRM_2
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
25773271
NCBI-ProteinID:
XP_013934083
UniProt:
W1QC84
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All DBs
Position
V:116158..116928
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AA seq
256 aa
AA seq
DB search
MSDNKYTPLIVDLFTPKVPLQYLPPADVPIEKRRTPKVDGIAQFLSSLKEHVEEYKDYKN
EFVSREAKAKLKSQQNKDALQRALLKWNPETDTNIAGDPYKTVFVGRLDYTVNEIELREK
FAQFGEIDQIRVVRDTNTGKSRGYAFILYKSESDAKLAFQKGNRMVIKDRAVIVDIERGR
VVKNWKPRRLGGGLGGRQIAQKHKHIEQQEPAPKMLYPPPASYGRGNYGYRGRGGRAPRP
YGHRPNRTPYNRPPRY
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgtcggataataagtatactccactgatagtggatcttttcacgcccaaggtgcctctt
caatacctgcccccagcagatgttcctatagagaaacggcgaacgcccaaagtggacgga
attgcgcagttcctgtcctctttgaaggaacatgtcgaagagtataaggactacaagaac
gagttcgtcagccgagaggccaaggcaaaattgaagtcgcagcaaaacaaagatgcactt
caacgagcgctactaaaatggaacccggaaacagacaccaacattgctggagacccgtac
aaaaccgttttcgttggaagactagattacacagttaatgaaatagagttgcgcgaaaaa
ttcgcacagtttggcgaaatcgatcaaatccgagtcgtgagagacaccaatactgggaaa
agtcgaggttatgctttcatcctgtacaaatcagagtccgatgccaagctagcgtttcag
aaaggtaatagaatggtgataaaagatcgtgcagtgatcgtagacattgaaagaggccgc
gtggtgaaaaactggaaacctaggagactaggaggtgggctgggggggcgccagatagca
cagaagcacaaacacatagagcaacaggaacctgctcccaagatgctgtatccgcctcca
gcgtcttatgggcgtggaaattatggttaccgaggccgtggcggaagggctccgagacca
tatggtcacaggcccaacagaacgccctacaaccgaccaccgaggtactga
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