Ogataea parapolymorpha: HPODL_03903
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Entry
HPODL_03903 CDS
T08137
Name
(RefSeq) putative condensin complex subunit
KO
K06675
structural maintenance of chromosome 4
Organism
opa
Ogataea parapolymorpha
Pathway
opa04111
Cell cycle - yeast
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
HPODL_03903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
opa03036
]
HPODL_03903
Chromosome and associated proteins [BR:
opa03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
HPODL_03903
Condensin II
HPODL_03903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
ATG16
AAA_29
AAA_13
SKA2
TMF_DNA_bd
SPAM
DUF7310
Motif
Other DBs
NCBI-GeneID:
25773336
NCBI-ProteinID:
XP_013934156
UniProt:
W1QEE1
LinkDB
All DBs
Position
V:complement(224711..228556)
Genome browser
AA seq
1281 aa
AA seq
DB search
MDQNKGNRQMLGPRDLNQQGVEVVALKPEQPSQTLQQPLALVQSQYAQEQKPDLKEEFQP
RLVIEELVLTNFKSYAGRQTVGPFNASFSAIVGPNGSGKSNVIDSLLFVFGFRATKMRQS
KLSELIHNSEAFPDLSFCQVDILFKKVLDRYDENGELQTEYLSVPDLVVSRKAYRNNSSD
YFINNKKCTYADMQALLRDQGIDLDHKRFLILQGEVESIAQMKPKAEGNSDDGLLEYLED
IIGTAKYKGTIESSIREIDDLNDICVQKAHRYEIVEKAKEDLEGGKENALKYLRKEKALA
DKKSLYLQYRLLKDKDLLEKKTAALESLKEKLAKEKEQTAQHNDEIDELTKHHHELSSEV
KAIEKQVASLKSAHKKIEREKISMDEKIKHNENRKKKAVKALQSSSSQVRENEANIAELE
RSQKESQTQLEELNSALKKEQEQLEAIKYELSDKTKDLSASVEKLQQQLEPWKDKISAKQ
AEIDIKTSQLEMLKQKHQELLNETKEIEGKADEKLELVKAKEKQIQHLQKEQAHVSEQIQ
LGETEVGEASEKLKAMESEIRVLRDKLDDARSRVTSTKSRNRVLQALTHLKNSGRLQGFY
GRLGDLGVIDDKYDVAVSTGGGSLDDMVVDSVETAQQCINYMRKNNLGFGKFIVLDKLRK
FNLSKIPTPNNVPRLFDLITPCDPKFAPAFYSSMYNTLVARNLEEANKVAFGAKRWRVVT
LDGKLVDVSGTLSGGGSRVFSGAMKLRSATTKGGEISEAELNAMVEDVQTKEDAFLKAQS
AFNEMETALATFKDRLPEIEMEISKLRLEIDMDQQEAKEAKARAKEVSANKKAISDTEER
ITKEEKAIAKLEAEKQDLKDQSQGLEDQIAELQDKIMQVGGVKLKMQKSKVDSVLQKLEI
LNEKESNDSLQLTKLKNQVTRLNNQISENEAEIKEAEEAIDQIREVYDTSLAKFQASEKE
LQDLSAQMDELVEKCDEIKEELNFKQSKIADLRKGEIKLVTEIEKCEQSISQCDRNIKKI
TDEMGHAETRDLETLVGWMEDCDTKQRLLAPPPEYSSEDLKKVDSEALASEIEELEKQTE
SMTVDLDILQEYARRYKEFNERKADLNESVTKRDELKQACEDLKKRRLDEFMAGFNTISL
TLKEMYQMITMGGNAELELVDSLDPFSEGILFSVMPPKKSWKNISNLSGGEKTLSSLALV
FALHRYKPTPLYVMDEIDAALDFRNVSIVANYIKERTKNAQFIVISLRNNMFELAQQLVG
IYKVSNMTKSISMQNRDILTA
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaaataaaggcaatcgccagatgttggggccgcgcgatctgaaccagcagggc
gttgaggttgtggctctcaagccagagcagccgtcgcaaactttacagcagccgctggct
cttgtgcaaagccagtacgcccaggaacagaaacccgacttgaaggaagaatttcagccc
cggctggtcattgaggagctcgtcctcacaaatttcaagtcgtacgcgggcagacagacc
gtgggaccgttcaatgcgagtttctccgcgattgttgggcccaacgggtccggaaagtcc
aacgtcatcgattcgcttcttttcgtgtttgggttccgtgccaccaagatgagacagtcg
aaactgagcgagttgatccacaattcagaggccttcccagatttgagtttttgccaggtc
gatatactgttcaaaaaggttctggaccgctacgacgagaacggcgagctccagacagag
tatctgtctgttcccgatcttgtagtttccagaaaagcgtaccgcaacaactcatcagac
tacttcatcaacaacaaaaagtgcacctatgcggacatgcaggcattgctacgcgaccag
ggaatcgacctagaccacaaacggtttctgattttgcaaggagaggtcgagagcattgcg
cagatgaaacccaaggctgagggcaacagcgacgacgggttgctggagtatttggaggat
atcattggcacggcaaaatacaaaggcaccattgagtccagtattcgcgagattgacgat
ttgaatgatatatgtgtgcagaaagcgcacaggtacgagattgtcgagaaagccaaggag
gatctggaggggggcaaagagaatgcattaaagtatcttcgcaaggaaaaggctttagca
gacaaaaagtcgctgtatttgcagtatcgacttttaaaggataaggatctgcttgagaag
aagactgccgctttggagtcgctgaaggagaagttggctaaagaaaaagaacagacagca
cagcacaacgacgagattgacgagttgactaagcatcaccacgaactgagctcagaggtg
aaagccattgagaaacaggttgccagtctcaagagcgcacacaagaaaatcgagcgagaa
aagatttcgatggatgagaaaataaagcacaacgagaaccgcaaaaaaaaagccgtcaag
gccttacagagcagctcttctcaggtgcgcgagaacgaggccaacattgccgaattggag
agaagccagaaggaaagccagacacagctggaggagctcaactcagcccttaagaaagag
caggagcagctggaggcaattaagtatgagctttctgacaaaaccaaagacctgtctgcg
tctgttgagaaattgcaacagcagctggagccctggaaagacaaaatcagtgccaagcag
gccgagatcgatatcaagacgtcacagctggaaatgctgaaacaaaagcatcaagagcta
ttgaatgaaactaaagaaatagagggcaaggcggacgagaagctggagcttgtgaaggcc
aaggagaaacagatccagcatttgcaaaaagagcaggcccacgtgtctgagcagattcag
cttggagagaccgaggttggcgaagcttcggaaaaactaaaagctatggaatctgagatc
cgtgtgctacgagacaagctcgatgatgcgagaagcagagtgaccagcacaaagtcacgc
aacagggttctccaggcactgacacatttaaagaactctgggcgattgcaaggattttat
ggccgtctaggtgatttgggtgtcattgacgacaaatacgacgttgctgtgtccacggga
ggtgggtcgttagatgatatggttgttgattccgtcgagaccgcacaacagtgtattaat
tacatgagaaagaacaatcttgggtttggcaagtttattgtcttggacaagctgagaaaa
ttcaatctctccaaaatccccacgccaaacaacgttccaaggctgtttgacctgatcacg
ccgtgtgatccgaagtttgcgccggcgttctacagttccatgtacaacacgctggttgcg
cgcaatttggaggaggccaacaaagttgcttttggagcgaagagatggcgtgtggtgacg
cttgatggtaagctggttgacgtgagtggaacgctgtctggaggagggtctcgggttttc
agcggcgccatgaagttgaggtctgctaccactaagggaggcgagatttcggaggcagag
ctcaatgcgatggttgaggacgtccagactaaggaagacgcatttctgaaggcccagagt
gcttttaacgaaatggagacggcattggctactttcaaggacaggctgcctgaaatcgaa
atggaaatctcgaaactgagactggaaatcgatatggaccagcaggaggccaaggaagcc
aaagcgcgagccaaagaagtgtctgccaacaagaaggcaatttccgatactgaagagcgg
attaccaaggaggaaaaggcgattgcgaagttggaggccgagaaacaagatctgaaagac
cagtcgcaaggtctggaagaccagattgcagagctccaggataagatcatgcaagttggc
ggtgtgaagttgaaaatgcagaaatcgaaggtcgactctgttttgcagaagttggagatt
ctcaatgagaaagagtccaacgactcgttgcaactcacaaagcttaagaaccaggtgaca
cgactgaacaaccagatcagcgagaacgaggctgaaatcaaggaggcagaagaggccatc
gaccagatacgtgaggtttatgacacgagtcttgcgaaattccaagcctcggaaaaggaa
ctgcaagatttgagtgcgcagatggacgagcttgtggagaagtgcgatgagattaaggag
gagctgaatttcaagcagtccaagattgcagatctcagaaaaggggagataaagcttgtc
accgagatcgagaagtgcgagcagagcatcagccagtgcgaccgcaacatcaagaaaatc
accgacgaaatgggccacgcagaaacacgcgatctggagactcttgttggctggatggag
gactgcgacaccaaacagcggctgttggctccgcctccggagtattcgtctgaggacctg
aaaaaagtggactccgaggccttggcgtcggagatcgaggagcttgagaaacaaaccgag
tccatgacagtcgatttggacattttgcaggagtacgcaagacggtacaaggagttcaac
gagcgaaaagcggatctgaacgagtcggtgaccaaaagagatgaacttaagcaggcgtgc
gaggatctcaagaagagacgtcttgacgagttcatggcgggtttcaacaccatttcgttg
acgctgaaagaaatgtaccagatgatcacgatgggcggaaacgccgagctggagctggtg
gactcgctcgatccgttctcggagggtattcttttttctgtgatgcctcccaagaagtcc
tggaaaaatatcagcaatctgtctggaggagaaaagacgctttcttctctcgcgctggtt
ttcgctctacaccgctacaagcccacgccgctctatgtgatggacgagatcgacgctgct
ttggatttcagaaacgtgagtattgtggccaattatattaaggagcgcacgaaaaacgca
caattcatcgttatttccctcagaaacaacatgtttgagcttgcccagcagctggtgggt
atatacaaggtgagcaacatgaccaagtccatctctatgcagaatagggatatattgacg
gcctga
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