Ogataea parapolymorpha: HPODL_03922
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Entry
HPODL_03922 CDS
T08137
Name
(RefSeq) hypothetical protein
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
opa
Ogataea parapolymorpha
Pathway
opa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HPODL_03922
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
opa03021
]
HPODL_03922
Transcription machinery [BR:
opa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
HPODL_03922
Prokaryotic type
Archaeal type
TFE
HPODL_03922
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
Zn_ribbon_4
Zn_ribbon_IS1595
Motif
Other DBs
NCBI-GeneID:
25773355
NCBI-ProteinID:
XP_013934175
UniProt:
W1QB87
LinkDB
All DBs
Position
V:complement(256979..258145)
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AA seq
388 aa
AA seq
DB search
MSLSKESEKEVKHLLRLVTRAFYAVPCALIMEVLLFHSVVYEEDMLKLTCMHRKVFRSYC
NRLLEDRLIVAYTQKEDSPQYRMMTTTYFFVRWVEAIDAIKWKIHSLVKMVKDEVDQLSD
PQGYVCPSCRTKYSLLDAASLLSEDKASFECSVCGDKLIEDDSGMEAQKGQEKLEKLMSQ
IEPIIESLKKIDNMKIEDNNFESSLVKAIPVSSSSVASYTVSSKVPRNGKPGGMSQSLQN
AAQKSQATVHVSITADDEEMRQERESKEQKSETLKQNALPSWHMESTVGKSLLNGLGQEI
PSVKKEATETGIEKPIKREESETDSGGRAGYSGSETAGSDATGPGTADTAEELDALEAYY
AQLRANQDAEDEEDDEDLDDAMFEDDME
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctttccaaagagtctgaaaaggaggtgaagcaccttctacggcttgtcacgagg
gcattctatgcggtgccgtgcgcgctcataatggaagtccttcttttccactcggtggtg
tacgaggaagacatgctgaagctcacctgtatgcatcgcaaggtgtttcggtcgtactgc
aatcggctgctggaagaccggctcattgtggcatatacacagaaggaggactcgccgcag
taccggatgatgacgacgacgtatttttttgtgcgctgggtcgaggccatcgacgccatt
aaatggaagatccattcactggtgaaaatggtgaaggacgaggtggaccagctcagcgac
ccgcagggctatgtgtgtccatcgtgccggactaaatattcgcttctggacgcggcgtcg
ctgttgagcgaggataaggcatcgttcgaatgctctgtctgcggagacaagctgatcgag
gatgattccggcatggaagcgcaaaaaggccaggagaagctggagaagctcatgtctcag
atcgagccgatcatcgagtccctcaagaagatcgacaacatgaagatcgaggataacaac
tttgagtcctcgctggtcaaggccatccctgtctcgtcgagctcggtggcatcgtacacg
gtcagctcgaaggtgccgcgcaatggcaagccgggcggcatgtcgcaatcgttgcagaac
gcagcacagaagtctcaggccacggtgcacgtgtcgatcacggcggacgacgaggaaatg
agacaggagcgcgagtcaaaggagcagaagagcgagacgctcaagcaaaacgcactaccg
tcctggcacatggagagtacggttggcaagtcgttgttgaacggcctagggcaggaaatt
ccaagtgtcaaaaaggaggctacggagacgggaatcgagaaaccgatcaagagggaggag
tcagagaccgactcgggcggccgtgctggctacagtggttcagaaacggcgggctcagac
gctactgggccgggaactgccgatacggccgaggagctggacgctttggaggcgtactac
gcgcagttacgtgctaaccaggatgcggaggacgaagaggatgatgaggaccttgacgac
gcgatgtttgaggatgatatggagtga
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