Ogataea parapolymorpha: HPODL_03944
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Entry
HPODL_03944 CDS
T08137
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA190
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
opa
Ogataea parapolymorpha
Pathway
opa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HPODL_03944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
opa03021
]
HPODL_03944
Enzymes [BR:
opa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HPODL_03944
Transcription machinery [BR:
opa03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
HPODL_03944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
ALTTAQ_rpt
Motif
Other DBs
NCBI-GeneID:
25773376
NCBI-ProteinID:
XP_013934197
UniProt:
W1QCQ2
LinkDB
All DBs
Position
V:complement(289482..294377)
Genome browser
AA seq
1631 aa
AA seq
DB search
MNIAKPVGSQIESVDFGVLTTSDVRKLSAKQITNPTVFDNLGHPVPGGLYDLSLGAFLKN
LCATCGLDDKYCPGHQGHIELPIPVYNPLFFNQMYIFLRSSCLYCHHFRLRATEVHKYEC
KLRLIQYGLLLEALELDNMRSDAELNEDEAIEDDGPVAVNSKSDKELMDKRQEFVEISIA
KALSEGRTTERGVMTATVAEERKALIHDFYKHILSRPRCDNCGMYSPQFRKDGFSKIFEL
GLKDKQLTNNRIKGVKRQDMLKNGSKDKQPDTDPYSQPREGSKYVLSTEVRNILRKVFKT
EQKVMDLLFHSRPLSRSPVSADMFFIHALVVPPTRFRLPSKLGDEVHENSQNELLSKILT
TSLMIRDLNEQFSVLSKEISTEDRKIIFNRLMNAFVTLQNDVNGFIDSTKNQNQNSNTAH
PGIKQALEKKEGLFRKHMMGKRVNYAARSVISPDPMIETNEIGVPPVFAKKLTYPEPVTV
HNVAELRQAVINGPDRWPGALQVQNEDGSLVSLVGMSLEQRTAIAKQLLTPSNGSDVVNK
KVYRHIRNNDVVIMNRQPTLHKASMMGHKVRVLPGEKTLRLHYANTGAYNADFDGDEMNM
HFPQNENARAEAFNLANTDSQYLTPTAGSPVRGLIQDHISAGVWLTSKDTFFTRDKYQQL
VYGCIRPEDGHSTSLRLVTVAPAVIKPQPLWTGKQVITTILLNIKPQELPGINLRSKNKI
KNEYWGDGSRENEVLFQNGELLCGILDKSQYGASQYGFIHSLHEVYGPTVAGKALSVLGR
LFTNYNMMMGLTCGMDDLKLTEDGNKWRSSLLEESSDIGRIAAAEVTNLDREVRVDDPEF
LRRMEEILRDDGKLAILDAVAQSKVNAITSKVVSQCVPAGTMKKFPANAMQTMALSGAKG
SNVNVSQIMCLLGQQALEGRRVPVMVSGKTLPCFKPFETDVRAGGYIKNRFYSGIRPQEY
YFHCMAGREGLIDTAVKTANSGYLQRCLTKQLEGVHVSYDNTIRNADGTLIQFLYGGDSI
DVTKESYMHQFKFFLENYNSLLQKYSPSSIDNLDTETAVSYNKKFRKQLKKQAALPHYAQ
SLKYDPTVSVYNPSKYLGSVSDKFEDELDKFIEENQHLFVSGKDAKTRGGLTQKKFKALM
QLKYMRSLVNPGEAVGIVASQSIGEPSTQMTLNTFHFAGHGAANVTLGIPRLREIVMTAS
ASIKTPQMTLPILDDVDDAAADAFCKSITKIRFSEFISDVSVVETTGSTGAQAARSYEIN
MRFFDCSDYEQEYDVTKEELEHVIKTKFIQALETAIIKEVKKQKKATSESLPAVGKAVAR
SQTELGAQTTAVVDEDADDEKLKSNTKQAVSYDGPDDEEVETMRRAEKSDDESLLDDSSS
GSESESDDEDDKMDVDAAKSNLVKENMSKAARERQQEVIINHNFVSQFNYDDEHGSWCDF
KLELSADTQKLLMVNIIEAVCKAVVVREVSGIGRCLHPENEQGKRILVTEGVNFGAMWEH
DAFINVNDIRSNDIAAVLRTYGVEAARNTIVNEVNNVFGRYAISVSSRHLDLIADYMTRE
GTYLAFNRQGIDSSTSSFTKMSYETTCQFLTKAVLDNDREELQSPSARIVIGKLNNVGTG
SFDVMAKMPVA
NT seq
4896 nt
NT seq
+upstream
nt +downstream
nt
atgaacattgccaagccagttgggtcccagatagagtcggtcgactttggggtgctcact
acctccgatgttcgcaaactatctgccaaacagatcaccaatcccacggtgtttgacaat
ctaggacacccagtgcccgggggtctgtacgatctgagtcttggagcctttctcaagaac
ctgtgtgccacctgtgggctggacgataagtactgtccgggccaccagggtcacatagag
ctgccgattcctgtctacaaccctctgtttttcaaccaaatgtacatatttctgaggtct
tcctgtctatactgccaccattttagactcagagccacggaggtgcacaagtacgaatgt
aaactgcgactgatccaatacgggctgttgctagaggctctggagctggacaacatgcgc
tcggatgccgaattgaatgaggatgaggctattgaagacgatggtccagtagccgtcaac
agcaagtccgacaaagagctgatggacaagagacaagagtttgtcgaaataagcattgcg
aaggcgctctctgagggccgcaccacggagaggggcgtcatgacggctacggttgcagaa
gagagaaaagctttgattcacgatttctacaagcatatattgagcaggccgagatgcgac
aactgtggaatgtactcgccacaattcagaaaagacgggttttcgaaaatcttcgagctg
ggtcttaaggacaagcagctgaccaacaatagaatcaagggggtcaagagacaggatatg
ttgaagaacgggtctaaagacaagcagccggacacagatccttactctcagccaagggag
ggctccaaatatgttttgtccacggaggtccgcaacattctgagaaaagtgtttaagacg
gagcagaaagtgatggacctgctgttccactctcggccgttgagcaggtcgcctgtttcc
gccgacatgttcttcatccacgctcttgtggtgccaccaacgcgcttccgtcttccctct
aagcttggcgacgaggttcacgagaactcccaaaacgaactgctgtcgaaaattctcacc
acctctctgatgatcagagacctaaacgagcagttttcggtcctgagcaaggaaatcagc
acagaggaccgcaagatcattttcaaccggctgatgaatgcatttgtcacgctgcagaac
gacgtcaacggatttatcgactccaccaagaaccagaaccaaaatagcaacaccgcgcac
ccgggaatcaagcaggcgctcgagaagaaggaaggattgttcagaaagcacatgatggga
aaacgtgtgaactacgcggcgcggtcggtcatttctccagacccgatgatcgagaccaac
gagatcggcgttccgcccgttttcgccaagaaactcacgtatcccgagccagttaccgtc
cacaacgtggccgagctcagacaggccgtcattaacgggccagacagatggcctggagca
ctgcaagtgcaaaatgaagacggcagcctcgtgtctctggtgggcatgagtttggagcag
agaacggccattgccaaacagctgctcaccccgtccaacggctcggacgtggttaacaaa
aaagtgtacagacacatcagaaataacgacgtggtgatcatgaatagacagccaacactg
cacaaggcgtcgatgatgggccacaaggtcagagtgctgccgggtgagaagacgctgcgg
ctgcattatgccaataccggagcctacaatgccgactttgacggagacgagatgaacatg
cacttcccgcagaacgagaatgcgcgtgccgaggctttcaacctcgccaacaccgactcg
cagtacctgacgccgaccgcaggttcgcccgtgagaggactgatccaggaccacatttct
gcaggtgtctggcttaccagcaaggacaccttcttcaccagagacaagtaccagcagctg
gtgtacgggtgtatacggcccgaggacgggcactcgaccagtttgcggcttgtgaccgtt
gcgcctgccgtgataaagccgcagccgctgtggacgggcaagcaggtgatcaccacgatt
ttgctcaacatcaagccgcaggagttgccgggtatcaatctcaggtccaaaaataagatc
aagaacgagtactggggcgacggatctcgcgaaaacgaggtgctgttccagaacggcgag
cttctgtgcggaatcctggacaagtcgcagtacggtgcgtctcagtacggattcattcac
tcgctgcatgaggtttacggcccgacggtggcaggaaaggcgctatctgtgctgggacga
ctgttcacgaactacaacatgatgatggggctgacgtgtggtatggacgatctgaagctg
actgaggacggaaacaagtggagaagcagtctgttggaggagagttctgacattggtcgt
attgccgctgccgaggtgacgaatctcgaccgtgaggtcagggtggacgacccggagttt
ttgagacggatggaggagattctgcgcgacgacggcaagttggctattctggacgcggtc
gcacagtccaaggtcaacgcgatcacgtcgaaggtggtgtcgcagtgtgtgccggcagga
acgatgaagaagttccctgcgaacgccatgcaaacgatggctctgtcgggagccaagggt
tcgaacgtgaacgtgtcgcaaatcatgtgtcttttgggccaacaggctttagagggccgc
agagtgccggtgatggtgtcgggcaagacgctgccatgcttcaagccgttcgagaccgat
gtgcgagctggcggttacatcaagaaccggttttattcaggaatccgtccgcaggagtac
tatttccactgtatggccggcagagagggtctgatcgacactgctgtcaagacggccaac
tctggctatttgcagcgttgtctgaccaaacagctggaaggagtgcacgtttcgtacgac
aacacgatcagaaacgccgacggcacgctgatccagttcctatacggcggtgactcgatc
gatgtcaccaaggagtcatacatgcaccagttcaagttcttccttgagaactacaactcg
ctgttgcaaaaatacagtccatcatcgatcgacaacttagacaccgagacagcggtgtca
tacaacaaaaagttccgcaagcagctcaaaaaacaggctgcactgccgcactacgcacag
agcctcaagtacgacccgacggtctcggtgtacaacccaagcaagtatctgggctctgtt
tcggacaaattcgaggacgagctcgataaattcattgaggagaaccagcacctgtttgtt
tcgggtaaagacgccaagactagaggcggactgacgcagaagaagttcaaggcgctgatg
cagctcaagtacatgcggtcgctcgtgaacccgggcgaggccgtgggcattgttgcatcg
cagtcgatcggcgagccgtcgacgcaaatgacgctcaacacgttccactttgcgggccac
ggcgcagcgaacgtgacgctcggtattccgcgtttgcgagagatcgtgatgacggcgtcg
gcgtcgatcaagacgccgcagatgacgctgccgatcctcgacgacgtcgacgacgccgct
gccgacgcgttctgcaagtcgatcactaaaatcaggttctccgagttcatcagcgacgtg
tctgtggtggagacgacaggcagcacgggtgcacaggcagcacgctcgtacgagatcaac
atgcgcttcttcgactgctccgactacgaacaggagtacgacgtcaccaaggaggagctg
gagcacgtgatcaagacgaaattcatccaggcgctcgagacggccatcatcaaggaggtg
aagaagcagaaaaaggccacgagcgagtcgctgccggccgttggcaaggccgtggcacgc
tcacagacagagctcggcgcacagacgacggccgttgtcgacgaggatgccgacgacgaa
aagctcaagagcaacacgaagcaggccgtctcgtacgacggtcccgacgacgaggaagtg
gagaccatgcgtcgcgcagagaagtccgacgacgagtcgctgctcgacgacagctcgtcg
gggtccgagtccgagtccgacgacgaagacgacaaaatggacgtcgacgcggccaagtcc
aacctcgtgaaggaaaatatgtccaaggctgctcgcgagagacagcaagaggtgatcatc
aaccacaactttgtgagccagtttaattacgatgacgagcacggctcgtggtgcgatttc
aagctcgagctgagcgccgacacgcagaaattgctcatggtgaacattatcgaggccgtt
tgcaaggctgtggtggtgcgcgaggtgagcggcatcggaagatgtctgcatccagaaaac
gagcagggcaagcgtattctggtcaccgagggtgtcaatttcggcgccatgtgggagcac
gacgcgtttatcaacgtcaacgacatccgttccaacgacattgctgccgtgctacgcaca
tacggtgtcgaggccgccagaaacaccattgtcaatgaggtcaacaacgtgtttggacgg
tatgccatctctgtctcgtccagacacctcgacctgatcgccgactacatgacgagagag
ggcacgtatcttgcgttcaatagacagggcatcgactcgtccacatcgtcgtttactaag
atgtcgtacgagacgacgtgtcagttcctgaccaaggcggtcctggacaacgaccgcgag
gagctgcagtcgccttctgcgcggattgtcatcggaaagctcaacaacgtcggaaccggc
agcttcgacgtgatggctaaaatgccagttgcatga
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integrated database retrieval system
