KEGG   Ogataea parapolymorpha: HPODL_03976
Entry
HPODL_03976       CDS       T08137                                 
Name
(RefSeq) Transcription elongation factor
  KO
K11292  transcription elongation factor SPT6
Organism
opa  Ogataea parapolymorpha
Brite
KEGG Orthology (KO) [BR:opa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:opa03021]
    HPODL_03976
   03036 Chromosome and associated proteins [BR:opa03036]
    HPODL_03976
Transcription machinery [BR:opa03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     HPODL_03976
Chromosome and associated proteins [BR:opa03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    Other Histone chaperones and regulators
     HPODL_03976
SSDB
Motif
Pfam: SH2_2 HTH_44 YqgF Spt6_S1 HHH_7 SPT6_acidic Tex_central_region SH2 HHH_9
Other DBs
NCBI-GeneID: 25773407
NCBI-ProteinID: XP_013934230
UniProt: W1QBG7
LinkDB
Position
V:344832..349157
AA seq 1441 aa
MSDRESSIVAENENELKTGEDFIENVAEQDAEDNANDEVSALDSSEEDEDEDEDEEALRK
VREGFIVDDEESSQEDESIDEDERRRRRKHKKRKREAIRKLEEDDELDEDDLELLRENAG
ELPRHLAEKTKFKRLKRGGDDQTSAGPTSKGLTDMFSDEEGAGEEDGEEGEEQEEEEDDL
MEASKKLRQQRQQDLLGEFDDFIEDDEFSEDEEERDERLARMRSARAKQANLASNSQFDQ
DKLDELYEIFGDGEEYAWALEAESLDEEPEMEDEVDEEGYAVKKLSKETHALNKVFEFEE
LKEHLLTDRDQEIRITDIPERYQAYRERITNYDLNDEEFQLKQNWVSKVLLEEKKAFFLG
KEDLVEPFQKAVAQIVYFVSKDNLEVPSIWNCRKDYTLHTYREDGQLRVQKLLTEDDLWR
IVQLDIDFYALLEKKKNIEKQFKSLDTVDTLYDEYIDSAKTVTELQDLQEYLSFTYSARQ
RELYPEETKGKQKSHSKYKIFERIKSDPVYEVIDKIGINAEKFGENVFTNNKIYLVDDID
KKADDLISECVEKGSFFDTVEKASNAIKHMFSEQLFHNPKLRAHLRLAFQSYASVDIKLT
EKGRLKITESSPYADFKYAINRPLESFTLQPDLFLRMLEAESLGLVKIDIGLKNAFANFA
DHLFTFLSSDGTSDLSNSWNSLRRECLDMALKKLIPSIVLDVKEKLRDTCERLLFYEIRE
SFMEKVDQAPFHPLPTAKGTVPKVLAITNGDGKRDSAIIAVAMDYDGTVFDHIKFEQNHR
HGDFEKQFLEIVRKFKPEVVAVSSYNVEVSHLFRKLQDIVRLNNLTVEIDVDEEYEGDPI
PLPVIYVPNETSRLYEHSDRAAEEFSDKPVVARFCIGVARYVQSPLLEYMALGDAVTSIS
VHKHQNLLPTHKVKEAIDTIFVDVACLVGIKINDAVRSPYLSTMLQYIAGLGPRKASSLI
RGIEANGGSLLRRDELIVRELSTKVVFMNCAPFIELPVPDRPDKDVELLDATRIHPEDYE
LARKMASDALDLSEEEKQEIEQEEGGVISKLYDEGVEKLDDLLLEGYADQLEEHGHRKRA
TLEMIKEELQNNYEELRKSFHILSEDEVFEMLTGESKELFQRGKLVSVILQRVDNRFMLG
VTQSGISCNISRSNALEYGDNTNLLTKYQNGQAVQAVVQTVDYANFKAELSLLKRDIEEA
SRGKKVDKFQGLWDFEAEREDLAKEQEKEKKENSTKRVIKHPYFHNFNAREAEDYLASKN
NGEFVIRPSSKGNDHLTVTWKIENQLFQHLDVLELDKLNDYTVGRTLQVGEFRYHDLDEL
IVSHINNLYLKVEEIVNHDKFKNEPLNDTKEWLIRYSKANKNRSCYCFCYNHKSPGWFYL
LFKLNDKSDKLYTWNIKVQPNGYLLHGNLYPDMVHLCNGFKKLLQNQMSSSRSGYTSYGR
F
NT seq 4326 nt   +upstreamnt  +downstreamnt
atgtcggaccgtgagagcagcattgttgccgagaacgagaatgaactgaaaaccggcgaa
gactttattgaaaatgtagccgaacaggatgctgaagacaacgcaaacgacgaggtctca
gctctagactcctccgaggaggacgaggacgaagatgaggacgaagaagctctacgcaaa
gtgcgggaaggatttatcgtggacgatgaggagagcagtcaagaagatgaaagcatagat
gaggacgagcgcaggagacgtcgtaagcacaaaaagagaaagagagaagcaatcagaaag
cttgaggaggatgacgaacttgatgaggatgacttggagctgctcagagaaaatgctggt
gagctaccgcgtcatttagcagaaaaaaccaaattcaagcgtcttaaaaggggaggtgac
gatcaaacgtcggcaggaccgacctccaaaggcctgacagatatgttttcggacgaagag
ggcgctggggaagaggacggcgaggaaggagaagaacaagaggaggaggaagatgatctg
atggaagcctctaaaaagttaagacagcaacgacagcaagatcttctcggggaatttgat
gatttcattgaggacgacgagttctcagaagatgaggaagagagagatgagcgtcttgcc
aggatgagatcggcaagagccaagcaagcaaatcttgcttccaactcgcaattcgaccaa
gacaagcttgatgaactttacgaaatatttggtgacggagaggagtatgcatgggctttg
gaagccgaaagtctcgacgaagagccagagatggaagacgaggtcgatgaggaaggttac
gcggtcaaaaaactttccaaggagactcacgcgctgaacaaggtctttgaatttgaagag
ctgaaagagcaccttttgactgacagagatcaagaaatcagaataacagatattccagag
cgataccaggcttacagagagcggataactaactatgatttgaacgatgaagaatttcaa
ctcaagcaaaattgggtctccaaagttttgctggaggagaagaaggccttctttcttgga
aaagaagatctcgttgaaccattccaaaaggctgttgcccaaatcgtgtatttcgtctca
aaggacaacctagaagttccaagtatatggaattgcagaaaggactacacacttcacact
tatcgtgaagacggacagttacgagttcaaaaactgctgaccgaggacgatctttggaga
atcgtgcagctggacatagacttctatgcccttttggagaaaaagaagaacattgaaaag
caattcaagtcattggacacagtcgatactctttacgatgagtatattgattctgctaag
acagtgactgagttgcaggatcttcaagaatatctttctttcacatacagcgcaaggcaa
cgcgaactttaccctgaagagacgaaggggaagcagaagtcgcactctaaatacaagatc
tttgagagaatcaaaagcgacccagtttacgaagtgattgataaaataggtatcaatgcg
gagaaatttggagagaacgtctttacgaacaacaagatttacttggttgacgacatcgac
aaaaaagctgatgacttgatcagcgagtgtgttgaaaagggctcattttttgacaccgtg
gagaaagcaagcaacgctattaaacacatgttttctgagcagcttttccacaatccaaaa
ctcagagcgcatttgagacttgcattccagagttatgctagcgtggatataaagcttacc
gaaaaaggaagactcaaaatcactgagagctctccttatgctgacttcaagtatgctatc
aacagacccctagaatcgttcaccttgcaaccagatttgtttttgcgcatgttggaagcc
gaatcattggggcttgtgaaaatcgacatcggcctgaaaaacgccttcgcaaacttcgct
gaccacctatttacgtttttgtcgtcggatggtacctctgatctgagcaattcttggaac
agcctaagaagagaatgtcttgacatggctttgaaaaaactcattccatcgattgttctt
gatgtcaaagaaaagctaagagacacatgtgaaagattactgttttacgaaatcagagag
agcttcatggagaaggtggaccaggctccgttccacccactcccaaccgccaagggcact
gttccaaaggttttggcaatcactaatggtgatggaaagcgtgattctgcaataattgct
gttgcgatggactacgacggaactgtttttgaccacatcaagtttgagcaaaatcacaga
cacggagattttgagaagcaatttttggagattgtcaggaagtttaagccagaggtggtc
gctgtgtccagctacaacgttgaagtttctcaccttttcagaaagcttcaggacattgtc
agactgaacaatctcactgttgaaattgatgttgatgaggaatacgagggcgacccaatc
ccacttcctgttatctacgttccaaatgaaaccagcagactttatgagcattccgaccgg
gcagctgaagagttcagtgacaagccagtggtggcccgtttctgtattggtgtggcaaga
tacgttcagagtccattgttagaatatatggcattgggggatgcagtgacttctatttct
gtgcacaaacatcaaaatttgcttccaactcataaggtcaaggaagcaatagatacgatc
tttgttgacgttgcctgtctggtcggcatcaagatcaatgacgccgtgaggtccccttac
ctatctaccatgctgcaatatattgctggtctcggccctagaaaagccagcagcttgatc
agaggcatcgaagccaatggaggctctttgctgaggagagacgagctgatcgtgagagag
ctatccaccaaggtggtgttcatgaactgtgctccgttcatcgagctgccagttcctgac
aggccagacaaagacgttgagctcctggatgccaccagaatccatcctgaggattatgag
cttgccagaaaaatggcgagcgacgctttggacctcagcgaagaagagaagcaggagatt
gaacaggaagaaggtggtgtcatttccaagctttacgacgaaggagtcgagaaactggat
gaccttcttcttgaaggttatgctgaccagttagaagagcacggacatcgtaagagagcg
accttggaaatgatcaaggaagagttgcagaacaactatgaggaactcaggaaatcgttc
cacatcctcagcgaggatgaggtttttgaaatgcttacgggcgaatcgaaagagcttttc
cagcgtggaaaactagtttcagttattttgcaaagggttgacaacagattcatgttggga
gttactcagtctggaatttcgtgtaacattagcagatccaatgcgctagaatacggagac
aacacaaacctactcacgaagtaccagaatggacaagcagttcaagctgttgttcaaaca
gtcgactacgcgaatttcaaagcagaattgtctttgctgaaacgtgatattgaggaggca
agtcgcggaaagaaggtggataagttccaaggtctgtgggacttcgaggctgaacgtgag
gatcttgctaaggagcaggaaaaagagaagaaggagaacagcacaaaacgtgtcatcaag
catccatacttccacaatttcaatgcccgtgaagcagaggattaccttgcttccaagaac
aacggagagtttgtgatcagaccgtcttctaaaggaaatgatcacctgactgtcacctgg
aagattgaaaaccagcttttccaacatcttgatgtgttagagctagacaagctcaatgat
tacacagttggccgcacccttcaagttggagagttccgttatcacgatctggatgaactg
attgtctcccacatcaacaacctgtacttgaaggtggaggaaattgtcaaccacgataag
ttcaaaaacgaacctctcaacgatacgaaggagtggctcatcagatattccaaagccaac
aagaaccggtcatgctactgtttctgctacaaccacaagtctccgggatggttctacctg
cttttcaagctgaacgacaagagcgataagctgtatacttggaacataaaggttcagcca
aacggttatctgctacatggaaacctttaccctgacatggtccacttgtgcaatggtttc
aagaaattgctacaaaaccaaatgagcagctcaagaagcggttacaccagctatggtaga
ttctga

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