Ogataea parapolymorpha: HPODL_03978
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Entry
HPODL_03978 CDS
T08137
Name
(RefSeq) putative ATPase of the AAA family
KO
K22766
fidgetin-like protein 1 [EC:5.6.2.-]
Organism
opa
Ogataea parapolymorpha
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
opa03036
]
HPODL_03978
03400 DNA repair and recombination proteins [BR:
opa03400
]
HPODL_03978
Chromosome and associated proteins [BR:
opa03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
HPODL_03978
DNA repair and recombination proteins [BR:
opa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
HPODL_03978
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
AAA_22
RuvB_N
AAA_16
TIP49
AAA_14
DUF815
AAA_5
IstB_IS21
AAA_25
nSTAND_NTPase5
Mg_chelatase
AAA_2
NPHP3_N
nSTAND3
ABC_tran
AAA_24
AAA_28
AAA_7
GH149_ins_1
RNA_helicase
AAA_33
AAA_19
NACHT
bpMoxR
Sigma54_activat
PhoH
Motif
Other DBs
NCBI-GeneID:
25773409
NCBI-ProteinID:
XP_013934232
UniProt:
W1QCT3
LinkDB
All DBs
Position
V:<351348..>353495
Genome browser
AA seq
715 aa
AA seq
DB search
MFSRKKKEPSPPLPRLLEIYNEIANTSLTNLSLEQNNRSNEALNGWRTLHQAAAQKVEAL
EKSIAGVELTDEESYILDEIHILQAQADDHMDRLENKLNPPLPIQASKVYSNPQHSSSSA
GLKASPPGSRSNSVRANVPTLRSSNPVTMNSKRPVNKPLIKSLRPNQNIANNNSSGSLGN
SISSQATAKQAANLIWAPSKSLSTNKTYSSNSQEDLFQDFDGVIDDEEYHHKETLRQLQQ
NAFASKAARSKNDEDLIDLSENLSHLDIRQKPTPQPKQQVQKNHAKSSAERARAALKISS
QVKLPQKVAPSAVRQPARHASPARIARSPPRSTNVQLAKPQSRRANLSPGPTKPVSRPQS
GSRRASPHAKGSTTSAPKVLADNSTKDTETLDSDNSIEDDEDKLIASMRGVDPVAARQIL
NEIVVHGDEVHWDDIAGLDAAKNSLKETVVYPFLRPDLFSGLREPARGMLLFGPPGTGKT
MLARAVATESKSTFFSISASSLTSKYLGESEKLVRALFQLAKRLAPSIIFVDEIDSLLGS
RNNEGENESSRRIKNEFLVQWSDLTKAAAGRDQGEDLQRVLVLAATNLPWAIDEAARRRF
VRRQYIPLPEYDTRKAQLQRLLSHQNHTLTDKNLEELIQLTDSFSGSDITALAKDAAMGP
LRELGDKLLLTSKNEIRPVCLQDFINSLNYIRPSVSKEGLRQFEEWAKLYGSSGV
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgttttcgagaaagaagaaagaaccaagcccgccgctgcccaggctgctggaaatttac
aatgagatcgccaatacatcgcttacgaatttaagtttagagcaaaataaccgttcgaac
gaggccctaaatggctggagaacacttcatcaagcggcagctcaaaaggtggaagcgctt
gagaagagtatcgcaggggtagagctaacggacgaggagtcctatattttggatgaaatc
cacattctgcaggcacaggcggatgaccatatggatagattagagaacaaactaaatccc
ccccttcccattcaggcgtctaaagtctattccaatcctcaacattcctccagttctgct
ggtctaaaggcgtctccccctggttccagatccaactctgtgcgagcgaacgttcctacc
ttgagatcctcaaatccagtaacgatgaactccaaaagaccagtcaacaaaccattgatt
aagtcgctccgtcccaatcagaacatagctaataacaactctagcggaagtttgggcaac
tccatctcttcccaagccacggctaagcaagctgcaaacttgatttgggcgccatccaaa
agtttatctaccaacaagacgtactcatcgaactcacaggaagacttatttcaagacttt
gatggtgtcattgatgatgaggaataccaccacaaagaaaccctcagacaattacaacaa
aacgcttttgcatcgaaagccgccagaagtaaaaacgacgaagacctaattgacctcagt
gaaaacctgtcacatctggatattcgtcaaaaaccaacgcctcaaccaaaacaacaagta
caaaagaatcatgctaagtcatcagcagagagagcacgggcggcgctgaagatttcatcg
caggtcaaacttcctcaaaaggtagcccccagtgctgttcgtcaacctgcccgccatgca
tcgccagcaagaattgccagatctccaccccgatcgacaaatgtgcaactcgccaaaccc
caaagccgcagagcaaacctttctcctggtcctactaaacctgtttcaagacctcagtct
ggttccaggagagcttcaccacacgctaaaggatcaacgacaagtgctcctaaggtgctc
gctgacaattctacaaaagatactgaaacgttggacagtgacaattcaattgaagacgac
gaagacaaactaatagcctctatgagaggcgtggatcctgttgccgctagacaaattctc
aacgagattgtggttcacggagatgaagtccactgggacgatatcgcgggactcgatgct
gccaaaaattctctcaaggagacagtggtttacccatttttaaggccagacctgttcagt
ggcttgagagagcctgctcgaggaatgctgttgtttggacctcctggaacaggaaaaact
atgcttgcgcgtgccgttgcaacggaatcaaaatcaacatttttctcgatatctgcgtct
tcactgacttcgaaatatcttggtgaatccgaaaagctggttagagcgttgttccaattg
gccaaaagacttgctccttcaataatctttgtggatgagatagactccttattgggaagc
agaaataatgagggcgaaaacgagtcttcaaggaggatcaagaacgagttcttggttcag
tggtctgatttgaccaaggccgcagctggaagagaccagggagaagatctacaaagagtt
ttagtgctagcggccacgaacttaccatgggcgatagatgaagctgcaagaagaagattt
gtgagacggcaatatatcccgcttccagaatatgatacccggaaagcccaactacagagg
cttctttcgcatcaaaaccatacattaacggacaagaacttagaggaactaatacagttg
acggattcgttttcaggatccgatatcacagctttggcaaaggacgcagctatgggacca
ttaagagagctaggagacaaattgcttctaacatcaaaaaacgagatcaggcctgtctgt
cttcaagatttcattaactctttgaattacatcagaccaagtgtctcaaaagaaggcctt
agacaattcgaagagtgggctaagctgtatggatcctcgggtgtctaa
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