Ogataea parapolymorpha: HPODL_04028
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Entry
HPODL_04028 CDS
T08137
Name
(RefSeq) Vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
opa
Ogataea parapolymorpha
Pathway
opa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
HPODL_04028
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
opa04131
]
HPODL_04028
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
opa04147
]
HPODL_04028
Membrane trafficking [BR:
opa04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
HPODL_04028
Exosome [BR:
opa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
HPODL_04028
Exosomal proteins of colorectal cancer cells
HPODL_04028
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Ortholog
Paralog
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
Vps36-NZF-N
BBL5
Motif
Other DBs
NCBI-GeneID:
25773459
NCBI-ProteinID:
XP_013934284
UniProt:
W1QBH9
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Position
V:complement(<460197..>461987)
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AA seq
596 aa
AA seq
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MQVQRFQFTSEFWEYVQLSNGGRPICSSSERNLFLGTNVGLYLGNSKIENYQNGRLYLTN
LRLIYVPFTSNEALEKNVGLSLNLAYIENLQFQAGFMRSSPKILLTLTKLSPDLEYDTVH
NTLDWDCPICSHLNKCDLKVVSGLNVPKCEVCGVSANVYELNKLKVEKQNNSRSKAYKRG
YDNSSSNPMICTNHPANRLQLQTSGSLDSQKHDLPNAISSKSKPIFCLSVKIDGIDQFSF
KLSFRNGGARTFYDKLKFALGQAKWLHADSRYQVNAGALKVARYCSPTDTDIQSTPSNMT
STLNFESTEKRAGIHGLETLTSLKNSEVSTFLNSSLGDLQNLMDKSKDLAKIGDDYRRML
MSSKTVDKEVGHAVELLSRSRNSLKLLGNLLDDRETINEANDFYTVESLNLLKQAGGTQA
GSSLYVEELSRQVYDFIIQENILRDKNGLVTALDLYCLFNKRKGFYSVSPHNFLLATVSL
KRYNPDLQLIELQLQSLQKVEGKTAGETTEKARSLYAICSSTMNAKSISRSILEVLESGV
SGGYSALEFQNMCSIQTNLLLLQSVLNVLTRDGVLCVDSTLQGEKYFRNEIIHFRA
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtacaaaggtttcaattcacttcggaattctgggagtacgtgcagttgagcaat
ggaggtaggccaatatgctcctcaagtgaaaggaacttgtttcttggaacgaatgttggt
ttgtatttgggaaactcgaaaatcgagaactatcaaaacggccgactatatctaacaaat
ttgcgcctcatctatgtcccatttacatccaatgaggctttagagaagaacgtaggtttg
tcattgaatctagcctacatcgaaaaccttcaatttcaagcaggattcatgagatcaagt
ccaaaaatccttttaactttgactaaattatctccagatctagagtatgatacggtccat
aacactcttgattgggactgccccatatgttctcatttaaataaatgtgatctgaaggtg
gtatcggggctgaatgttcccaaatgtgaagtttgcggagttagcgccaacgtctacgag
ctcaataagctcaaagttgagaagcaaaacaattctcgatcgaaagcttacaagaggggc
tatgataacagtagttccaatccaatgatctgcacaaaccatcctgccaatagattgcag
ttgcagacaagtgggagtttggactcacagaaacatgatctaccgaatgcaatatcatca
aagtcaaaaccgattttttgtctatcagttaaaattgatggcatagatcagttcagtttc
aagctaagctttagaaatggaggcgctcgaactttttatgacaagctgaagtttgctctc
ggacaagccaaatggttacatgcagattcaagatatcaggtcaatgctggtgctttgaaa
gtggcacgatattgttctccaactgataccgacattcagtcaacaccatcgaacatgacc
tcgactttgaattttgagtccactgaaaaacgcgctggtattcatggactggaaacgctg
acttctttaaaaaatagtgaagtttccacatttctcaacagctcgctcggagacctacag
aacttgatggataaaagcaaggatttggcaaagattggagacgactataggcgaatgttg
atgagcagtaaaacagtagataaggaagttggtcatgcagtcgagcttctctcgcggtcc
agaaattccttgaagttactgggaaatctacttgacgatcgtgaaactattaatgaagct
aatgacttttatactgtcgagtcactcaatttacttaaacaagcgggtggcacacaagct
gggtcgtctctttacgtggaagaactttctcgacaagtgtacgattttatcattcaggaa
aatatactcagagacaaaaatggattagtcacggcccttgatctctactgtctcttcaat
aaaagaaaaggattttattcagtttctcctcacaacttccttcttgcaacggtctccctt
aagcgatacaatcctgatctgcagctcatcgagttacagctacaatctcttcaaaaggta
gaggggaaaacagcgggggagacaactgaaaaggctcgctcgctttatgctatctgttcc
tcgacgatgaatgccaaatccatttcgagatcaattttagaggttctagagtctggcgta
tctggaggctattctgccttagagtttcagaatatgtgttcaatacagacgaatttactt
ttacttcaatcggtcctaaacgtactgactcgagatggtgttctgtgtgtcgattcaact
ctacaaggtgaaaaatatttcaggaacgagattattcactttagggcctaa
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