Ogataea parapolymorpha: HPODL_04097
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Entry
HPODL_04097 CDS
T08137
Name
(RefSeq) putative ATP-dependent chromodomain helicase
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
opa
Ogataea parapolymorpha
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
opa03021
]
HPODL_04097
03036 Chromosome and associated proteins [BR:
opa03036
]
HPODL_04097
Transcription machinery [BR:
opa03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
HPODL_04097
Chromosome and associated proteins [BR:
opa03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
HPODL_04097
SLIK complex
HPODL_04097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Cdh1_DBD_1
Helicase_C
HTH_CHD1_Hrp3
Chromo
HDA2-3
CHD1-like_C
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
25773528
NCBI-ProteinID:
XP_013934353
UniProt:
W1QD04
LinkDB
All DBs
Position
V:complement(<594348..>598502)
Genome browser
AA seq
1384 aa
AA seq
DB search
MSTDIRSEIESNPELYGLRRSGRARSKPLGVAEFSDEEDEDYTAKKKTRQKRAYSDDEAA
LDDDMLDSDDSEYGGKKKRGRPRKKKQPAYKSSEQFPGFTELRLSNRSNRAVNYALDADD
DEFLESEDEDGEAYGEYYSAEPEEVAPEEGIDQVLDHRVIGEESDVSDDDDTKFEEHKKR
VQDVLANGDPKTDFEYMIKWTNTSHLHNTWETYDAIKSRNVKGMKKVDNYINLYIINDRE
IRKDPFVTREDIEQMELENETRRENLQEYKKVERIVDSERVTLETGESDLRYLVKWKRLN
YDECTWESGSEIAPLAPQEVTKFQNRQNSKILPGLSASYGSNRPRFEKLTSQPLFIKNGE
LRDFQLTGLNWMAFLWSRNENGILADEMGLGKTVQTVSFLSWLIYARRQNGPHLVVVPLS
TVPAWQETFDKWAPDVNVIYYMGNTKSRKAIRDYEFYVGGNRKKVKFNVLLTTYEYILKD
RAELGSFKWQYLAVDEAHRLKNAESSLYESLSEFKVANRLLITGTPLQNNLKELAALCNF
LMPGKFQIDQEIDFDTPNAEAEGYIKALQAEIKPFILRRLKKDVETSLPGKTERILRVEL
SDIQTEYYKNILTKNYGALNQGPRGSQISLLNIMAELKKASNHPYLFDGVEEHVLAKVGS
HSRENILKGLIMSSGKMVLLDQLLNKLHRDGHRVLIFSQMVRILDIIGDYLQLKGHSFQR
LDGTISSHKRRLAIDHFNAEGSKDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQ
AMARAHRIGQKNHVMVYRFVSKDTVEEQVLERARRKMILEYAIISLGITDNNKSKTKAEP
TSGELSEILKFGASNMFKSNDNQKKLENLDLEDVLNHAEDHVTTPDLGESNLGGEEFLKQ
FEVTDYKADVDWDDIIPEDELKKIKEEEEKRKEEAFLQEQIEMASRRRLAAVKKPEYDEQ
DDDEGPSRRQKKLDMNNLTESQIRNVYKAILRYGDISERLEELVADGTLPNKNIKILDQC
QREIMETSSRLVAEYEAKRAEELKELEAKAMEEKEQLAKLPPRADGQPHPTPAMQLYSAR
KRDKKAILFDYKGVKNMNAEVVLNRPQELKLLQSVIPADDPMKFKLTKEPKPVNGWSCKW
TIKQDTMLLIGVYKFGYGAWTQIRDDPILGLQNMMYLETPPAGASKEEKEKMSKRIPASI
HLVRRTDYLLGFLKEIQSNAGSHPEPKEPKKNSRPKKTAKKSSTPDVESKSGTPKPAGSG
ASSPTSSQPTLYQVMKNNKSSSPEAQKQKKPASSGAKSEHDLLKPVDKDLKIWESKGKGL
DKAEWGSKLKSSLISIGNQIEKVSKNDAKLNGKLWAMAQKSWPNAGVSSELIKKMYLKKV
GQHK
NT seq
4155 nt
NT seq
+upstream
nt +downstream
nt
atgtccacggatatacgttcggagatagaaagcaatccggaactgtacgggctgcggcgg
tctggaagggccagatcaaaaccgttgggcgtggcagagttctctgacgaggaggacgag
gattacacggcaaagaagaagacgcgtcagaaacgcgcgtattcagatgacgaggccgct
ttggacgatgacatgctggactcggacgactcggagtacggcgggaagaaaaagagaggc
cggccgaggaagaagaagcagcctgcgtacaagtcgtcggaacagtttcctgggttcacg
gaactgcggttgtcgaacagaagcaaccgggcggtgaattatgctctggacgccgacgac
gacgagtttctggagtctgaggacgaggacggcgaggcctatggagagtattattctgca
gagccggaagaggtggctcctgaggagggaattgaccaggttctggaccaccgtgtgatc
ggcgaggagtccgacgtctcggacgacgacgacacgaagttcgaggagcacaagaaacgc
gtccaggacgtgcttgctaacggagaccctaaaacggactttgaatacatgatcaagtgg
accaacacgtcgcatctgcacaatacgtgggagacgtacgatgcgatcaaaagtaggaac
gtcaagggcatgaagaaggtcgacaactatatcaacttgtacattatcaacgacagagag
atccgcaaagacccgtttgtcacgagagaggatatcgagcagatggagctggaaaacgag
acgagacgcgagaatttgcaggagtacaaaaaggtggagcggatcgtcgacagcgagcgc
gtcacgctcgaaacgggcgagtcggacctgcggtacttggtcaaatggaagcgactgaac
tacgacgagtgcacgtgggaatcgggcagcgagatcgcgccgctggcgccgcaagaggtg
accaagttccagaacagacagaactccaagattctgccgggtctttcagcgtcgtacggc
tccaacaggccgcggttcgagaagctgacgtcgcagccgctgttcatcaaaaacggcgag
ctgcgtgatttccagctgacggggctcaattggatggcgtttctgtggtcacgcaacgag
aacggcattcttgccgacgagatggggctcggaaagaccgtccagacggtgtcttttcta
tcgtggctgatctacgccagacggcagaacggcccgcatttggtggtcgtgccgctgtcg
acggttcccgcgtggcaggaaaccttcgacaagtgggctccggacgtcaacgtgatctac
tacatgggcaacaccaagtccagaaaggcgatccgtgactacgagttctacgttggcggc
aaccgcaagaaggtcaagttcaacgtacttctgacgacgtacgagtacattttgaaggac
cgtgccgagctgggaagcttcaaatggcagtatctggctgttgacgaggcgcaccggctg
aaaaacgccgaaagctcgctctacgagagtttgagcgagttcaaggtggccaatcgacta
ctcatcacgggaactcccttgcagaacaatctcaaggaactggcggcgctctgcaacttc
ctgatgccgggcaagttccagatcgaccaggagatcgacttcgacacgcccaatgccgag
gccgaaggctacatcaaggcgctccaggctgagatcaagccgtttatcctgcgaagactc
aaaaaagacgtcgagacgtcgctgcccggcaagaccgagcggattctcagagtcgagctc
tccgatatccagaccgagtactacaagaacatcctcaccaagaactacggcgccctgaac
cagggtccacgcgggtcgcagatctcgctgcttaatatcatggccgagctgaaaaaggcc
tcgaaccacccgtacctgtttgacggcgtcgaggagcacgtgctggccaaggttggctcg
cactcgagggaaaatatcctgaaaggtctgattatgtcttctggaaaaatggtgcttctg
gaccagctgctcaacaagctccacagagacggccaccgcgtgctcattttctcccagatg
gtgcgcattctcgacatcatcggcgactatctgcagctcaagggccactctttccagcgt
ctcgacggcaccattagctcgcacaaacgacgactcgctatcgaccatttcaacgcagaa
gggtccaaggactttgtgtttctgctatccaccagggcaggcggtttgggtatcaatctc
atgacggccgacacggtgatcatcttcgattccgactggaacccgcaggccgatttgcag
gccatggccagagcacaccgtatcggccagaaaaaccacgtgatggtgtacaggtttgtt
tcgaaagacacggtcgaggagcaggtgttggagcgggcgcgtcggaagatgattttggag
tatgcgatcatctcgctgggcattacggacaacaacaagtcgaagacgaaggctgagccg
acgtctggcgagttgagcgagatcctcaagtttggagccagcaacatgttcaagtcgaac
gacaatcagaaaaagcttgagaatctggatttggaggacgttttgaaccatgccgaggac
cacgtgaccacgcctgacctgggtgagtcgaatctgggtggcgaggagtttctgaagcag
ttcgaggtgacggactacaaagccgacgtggattgggacgatatcattcctgaggacgag
ctgaaaaaaatcaaggaggaggaagagaagcgcaaggaggaggcgttccttcaggagcag
attgagatggcctcgagacggcgtcttgccgcggtgaaaaagcccgagtacgacgagcag
gacgacgacgagggcccgtcgcggcgccagaaaaagcttgacatgaacaacctgaccgag
tcgcagatcagaaacgtgtacaaggcgattttgagatacggcgacatcagtgagcggctg
gaggagctagtggccgacggaacgttgccgaacaagaatatcaagatattggaccagtgt
cagcgagaaatcatggagaccagttcgcggctggtggcagagtacgaggcgaagcgtgcg
gaggagctgaaggagctggaggcgaaggcaatggaggaaaaagagcagctggcaaagctg
cctccgcgagcagacggccagcctcatccgacgccggcgatgcagctttacagcgcgaga
aagcgcgacaagaaggcgattttgttcgactacaagggtgtcaagaatatgaacgcggag
gtggttctcaacaggccgcaagagctaaagcttctccagagcgtgatacctgccgacgac
ccaatgaagttcaagttaaccaaggagccaaagccggtgaatggctggtcgtgcaagtgg
actatcaaacaggatactatgttgttgattggcgtgtacaagtttggctatggagcatgg
acgcaaattagagacgacccgatattagggttgcaaaatatgatgtatttggagacgccg
ccggctggcgcctcgaaggaagagaaggagaagatgagcaagcgaattccagcgtcgatc
catttggtgcggcgcacagactacctacttggatttttaaaagagatacagagcaatgct
ggctctcaccccgagccaaaggagccaaagaaaaatagccggcccaagaagaccgccaag
aagtcgagtacccctgacgtggaatccaagagcggcactccaaagcctgctgggtctggt
gcctcatctccaacgtcgtcgcagcctacattgtatcaggtgatgaaaaataataagagc
tcgtctccagaagcacagaagcagaagaagccggcttctagtggagccaagagcgagcat
gacctgctgaagcccgtggacaaggacttaaagatctgggagagcaagggtaaaggtctg
gacaaggcggaatgggggtcgaagctgaaaagctcgctgatcagcatcggcaaccagatc
gagaaggtgtcgaaaaacgacgccaaactgaacggtaaattatgggccatggcacaaaaa
tcgtggccaaatgcaggtgtgagctcagagctgattaaaaagatgtatctgaagaaggtg
ggtcaacataaatag
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integrated database retrieval system
