Ogataea parapolymorpha: HPODL_04104
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Entry
HPODL_04104 CDS
T08137
Name
(RefSeq) ribonuclease P
KO
K14533
ribonuclease P protein component, mitochondrial [EC:
3.1.26.5
]
Organism
opa
Ogataea parapolymorpha
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
opa03016
]
HPODL_04104
03029 Mitochondrial biogenesis [BR:
opa03029
]
HPODL_04104
Enzymes [BR:
opa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
HPODL_04104
Transfer RNA biogenesis [BR:
opa03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
HPODL_04104
Mitochondrial biogenesis [BR:
opa03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial ribonuclease P
HPODL_04104
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RPM2
PPR_2
Motif
Other DBs
NCBI-GeneID:
25773535
NCBI-ProteinID:
XP_013934361
UniProt:
W1QF10
LinkDB
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Position
V:<611678..>613819
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AA seq
713 aa
AA seq
DB search
MYILCINPPINSNMVLRSFVNLTERTGASFARRRASNVSSSSGSKCYSHPFFKPSYSKPQ
DLLIVDDVAREDSGRKTRYSRYCNILTPAAMVTRNYVIFDQSQNTDDETRGQTPILLKKA
GGKTNKNGHMSVCVGAVANGRRQLRLRRSNSTTVRTFALERPTGRREYSTVHELERQLRD
LQVGEMGETGETAEKSEQAKEVDPATPLSVHERLIDELLSSNRPSEVLAVYFNLRGKGLV
PTTALYNKVLRSIPQRTDTGESAEDKLTHLLNVYSDMLSNNLKPSDETYELVVGPLLKGA
QNSYSTGEFRNSNDFFRIALELFLISHNSNAAIRFDQAVYHDLVRGLNRFKCVQILAADK
LYELLKSRVDLTENLGLFLQLLKYAGYSKNTGLVNALYHDINDSIDAKVLEAQQYDIYAV
MLESLLLCGQSAEAAAFLDQVVGHCDKSEQHALSKLLSSFIAGQAALDPAKAYNSYLKFN
AVDWLPEVSVASLALVMRKFLDGNDFGSALQVWNMIVPRKDFDEAIQQLVQHDDYEYLSS
MVDTLVGAALDRMDRQNLIRFTREIIIKDSLVLSNESLLNLVSYLNSNERQTELATALVI
NQGYKKSRDGTSLNNYLSLLVDFLTPSQYQSLFGSGLFKTAVEQYRVVNDNIYGLIKIFD
YVSNLSQMTDQIKLKMKYYGKVLSFEFEDASNHYVQLPAELTRFKQYVSQLAE
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgtatatattgtgcatcaaccctccaataaattccaacatggttcttcgcagctttgtc
aacctcacggaacggacaggagcgtcgtttgcgcggcggcgggcgtccaacgtgtcgtcc
tcgtcgggcagcaagtgctattcgcacccctttttcaagccctcctactcgaagccccag
gatctactcatagtggatgacgttgcccgtgaggactctggtcgcaaaacacggtacagc
cggtactgcaacatccttacgcccgcggcgatggtgacgcgcaactatgtgatattcgac
cagtcgcaaaacaccgacgatgagacccgtgggcaaaccccgatcctgctcaagaaggca
ggcggcaaaacaaacaagaacggccacatgagtgtgtgcgtgggcgcggtcgccaacggc
cgtcgccagctgcggcttcggcggtcgaattccaccaccgtgcgcacctttgccctggaa
agaccgactggcaggagagagtactctacggtgcacgaactggaacgacagctgcgcgat
ctccaggtgggggagatgggggagacgggggagactgctgagaagtctgagcaggcgaag
gaagtcgatccagccaccccactctcggttcacgaacgtctgattgacgagctgctgtcc
agcaaccggccgagcgaggtgctggccgtctacttcaacctcagaggcaagggtttagtc
cccaccactgctctgtacaacaaagtcttgcgctcgatcccgcaacgcaccgacaccggt
gagtccgccgaggacaagctcacacacctgctcaacgtgtactcggacatgttgtccaac
aatttgaagccatccgacgagacatacgagctggtggtgggcccactgctgaagggcgcg
cagaacagctatagcacgggcgagttccgcaacagcaacgacttcttccgcattgcgctc
gagctgttcctcataagccacaactccaacgcggccatccgcttcgaccaggccgtctac
cacgacctcgtgcggggcctaaacaggttcaagtgtgtgcagattctcgctgccgacaag
ctctacgagctgctcaagtcacgtgtcgatttgaccgaaaacttaggcctgtttttgcag
ctgctcaaatacgccggttactccaaaaacaccggccttgtcaacgccctataccacgat
atcaacgacagcatcgatgccaaggtgctggaggcacagcagtacgacatttacgctgtc
atgctcgagtcactccttctttgcggtcagtccgccgaggcagccgcttttctcgaccag
gtggtcggccactgcgacaagtcggagcagcatgcgctttccaagctcctctcgagcttc
attgccggtcaggctgccctagaccccgccaaggcctacaattcgtacctcaaattcaac
gccgtcgactggctgccagaggtgtctgtggccagtctggcgctcgtgatgagaaagttc
ctcgacggtaacgacttcggctcggcattacaggtgtggaacatgatcgtgccgcgcaaa
gacttcgacgaggctatccaacagcttgttcagcacgacgactacgagtatctctcgtcg
atggttgacactcttgtcggcgcagcgctcgacagaatggacagacagaacctcatcaga
tttacaagagaaatcatcatcaaggacagcctcgtgctgtcaaacgagtcgctcctgaac
ctcgtgtcgtacctcaactcgaacgagagacaaaccgagctcgccacggcgctcgtcatc
aaccagggttacaagaagtccagagatggcacgagcctcaacaactacctgtcgctgctc
gtcgatttcctcaccccatcccagtaccagtcccttttcggctcaggactcttcaagact
gctgtggagcagtatagagtggtcaacgacaacatctacggcctgatcaagatctttgat
tatgtcagcaacctgtcgcagatgacggaccaaatcaagctcaagatgaagtactacggc
aaggtgctgagctttgagtttgaggacgcgtccaaccactatgtgcagctgccggctgag
ctgacgaggtttaagcagtatgtctcgcagctggcagaatga
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