KEGG   Ogataea parapolymorpha: HPODL_04156
Entry
HPODL_04156       CDS       T08137                                 
Name
(RefSeq) DNA repair/transcription protein MET18/MMS19
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
opa  Ogataea parapolymorpha
Brite
KEGG Orthology (KO) [BR:opa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:opa03036]
    HPODL_04156
   03400 DNA repair and recombination proteins [BR:opa03400]
    HPODL_04156
Chromosome and associated proteins [BR:opa03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    HPODL_04156
DNA repair and recombination proteins [BR:opa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     HPODL_04156
SSDB
Motif
Pfam: MMS19_C MMS19_N HEAT_EF3_N Cnd1 TCAD9 Vac14_Fab1_bd IFRD
Other DBs
NCBI-GeneID: 25773586
NCBI-ProteinID: XP_013934415
UniProt: W1QBY1
LinkDB
Position
V:696455..699538
AA seq 1027 aa
MSFQTPVNQFMVADNTETAGCQEAVRTICELIESNQVTLLEFIRGLGTHLTDDSNVIRTR
AITLLSSILGNLNRKKMYAKDVQVLLDFYLSKLDDEPCLREVLKGLSSLVLMSQFDPNLI
PHLLGFLVEKYSPLGKLASVRYFGFEVLDSVLSAHLEAAKQYNDEIIKTYLHVSKNEKDP
KNLLLSFKLSALIAQNFDISKFSEDMFDAVFCYFPISFRAPANDPYKITGDQLKQTLRNC
LSASDLYAKDAFPNLLEKLSATSPTVKLDVLMTLNQCVEKYSTATVEEYWITLWNSLKYE
ILHNELASVETLTQLFTYYENSENEDERIIPAVLKIFQSLSKKLQNVNEDLNIKDYLYVI
MDELAKNIKNHDDNKSKQSTVILAAICAANINVYNLLIPQVMPLLLVSDDLTIKTQRQIL
TNVSFMIDSYYILFNEKEESIRPNNPMYEFKDDLLMLFNKALLSTSKVEVSLRCLAVKLV
AKVVSLNFFLADQEAQLITQLVTDVLLEDDNSVTEKQILQCFKSLSVSYPSAVLEITVPK
LFSFLPDDDTDLDLLNTKSRVLDILISISESKLVIDSVMLRLVGKIEILIKSASQSYVRS
VFLTLCKIADKLNAKDSTNDNMRRLVPRLFYVVLDTDKTNHDEVVLEYTGRVAKKILLQT
DTSQHEEILRDAIDFFINGKPTPLVAKHLSKPLDIINGNQLPFIIFTKIISAVDKNVKFS
METSSFLNLLFKANQSTVQFSRLPVVQCISLVVNKWVDDSEYLAAILEDFKKALSDSSIP
LKERANTLEVLIWVGKALIMKQHACAQAYEEYLLSLFDSEELHVFTPKILEILVADVECY
QQFKKTGPFNRSIVFNVNVRLLYKQKLFNTVLPLLVSKFESSKNQTYLLALSLMLKYVDK
SIIIPHVETLLPLVLRSLSTDSNVIVTASLSILTIAVNESDELVSRHLSTVIPNLLEIVN
THKNETVKRNALECLLSLTKFDLHLLVPYKQDIITRLAKVLDDPKRSIRRLACDCRQAYY
ELGVPRQ
NT seq 3084 nt   +upstreamnt  +downstreamnt
atgtctttccaaacacccgtcaaccagttcatggttgcagacaataccgaaacggcaggt
tgtcaggaggcagtgaggactatatgtgagctcatagagagcaatcaagtcacccttcta
gagttcattcgtggtctaggtacacatctcacggatgattccaacgttattaggaccaga
gcgatcacccttctcagctctattctgggcaacctaaacagaaaaaagatgtatgccaaa
gatgtccaggtgctgctggatttttatttgtcgaagctcgatgacgagccttgcttgaga
gaagtgctcaagggtctgagctcgcttgttttgatgagccaatttgatcctaacttaatt
cctcacctgctaggcttcctcgtggaaaaatactccccattgggcaagttggctagcgta
aggtactttggatttgaggttctggactctgtgctatctgcccatttggaagcagcaaaa
caatacaacgatgaaattattaaaacatatttgcacgtttccaagaatgaaaaggacccc
aaaaatctgctgctgtcgtttaagctgtcagcgctgatagcacagaacttcgacatcagt
aagttttctgaggatatgtttgatgcggtgttttgctatttccctatctctttcagggcc
ccagcgaacgacccgtataaaatcacgggagaccagcttaaacagacactccgtaactgt
cttagcgccagcgacctctatgccaaagacgcttttcccaatcttcttgagaaactatcg
gctacctctccaacggtcaaactcgacgttcttatgacgcttaatcaatgtgtcgagaaa
tactcaacagcaacagtggaagaatactggatcacattgtggaattccctcaagtacgaa
attttgcataacgagcttgcttctgttgagacactgacgcagttgtttacgtactatgag
aattcagaaaatgaagacgaacggatcattcctgcagtcttgaagatcttccaatcgtta
agcaagaaattgcagaacgtgaacgaggatcttaacatcaaggactatctttatgtgata
atggacgagctggcgaagaatattaagaatcacgatgataataagtcaaagcagtcgacg
gtaattttagctgctatatgtgcggctaatatcaatgtctacaatctgcttattccccaa
gtaatgccccttctactggtatcggatgatttaacaatcaaaacccaaagacaaattttg
acgaacgtctctttcatgattgacagctattatattctcttcaacgagaaagaagaatct
attcgccccaacaatccaatgtatgagtttaaagatgaccttctgatgctatttaacaaa
gctttactgtcgacatcgaaggttgaggtgtcactcagatgtttagccgtgaaacttgtg
gccaaggtcgtctcactgaatttcttcctagctgatcaggaagcccaattgattactcaa
ctagtgacagatgtcctcctagaagatgacaacagcgtgacagaaaagcaaatacttcag
tgtttcaagtcgctatctgtaagctacccatctgctgtgcttgaaataactgttccaaag
ttattttctttccttccagacgacgacacggatctagatctattaaacaccaagtctcgt
gtgcttgatattctcatttccatttcggagtccaagctggttattgactctgttatgttg
cggctagttggaaagatcgaaattttgataaagtcagcgtcccaaagttatgtccgatca
gtgtttttgactttatgcaaaattgctgataaattaaatgccaaggattccacgaacgac
aacatgagacgactagtcccacggctgttttatgtcgttcttgatactgacaaaactaat
cacgatgaagtggttctggaatatacaggacgtgttgctaaaaagatattgctgcaaaca
gacacctctcagcacgaggaaatcttgcgcgacgcaattgatttttttattaacggcaaa
cctacacctcttgttgccaagcacttatcgaaaccgttggatatcattaacggaaaccag
ctgcctttcattattttcacaaaaattatttcggcagtcgataaaaatgtgaagttttct
atggaaacctcgtctttcctcaatctcctgttcaaagcaaaccagtcgacggtgcagttc
tcaagacttccagtggtgcagtgcatctcgctggttgtcaataaatgggttgacgactct
gaatacctggctgcaatcctggaagactttaagaaagccttgagtgactcttccataccc
ctcaaggaacgagccaacactttggaggtactcatctgggttggaaaagctttgattatg
aaacaacacgcatgcgctcaagcatacgaagagtaccttctctctttatttgacagtgaa
gagcttcacgtgtttacccccaaaattctcgaaatactggttgcagatgtagaatgctac
cagcagtttaagaaaactggtcctttcaatagatcaattgttttcaatgtgaatgtgcgc
ttgctctacaaacagaaactgtttaatacagtgctgcccttgctggtgtccaaatttgag
tcctcaaagaaccagacgtatttattagcattatcactcatgcttaagtatgtcgacaag
tcgattattattccgcatgttgaaaccctactgccacttgttttgaggtcgctgagcacc
gattccaacgtcattgtcactgcatcgttatccatcctaaccatagcagtcaatgaatca
gacgaattggtttcccgtcacttatcgactgtcataccaaatttactggaaattgtcaac
acgcacaagaatgaaacggtgaaacgaaacgcactggaatgcttgctttcactgacaaag
tttgatttgcatttattagttccctataaacaggatatcatcacgcgacttgccaaagtc
ctggatgaccctaagcgatcaattcgccgactggcctgcgattgtagacaggcatattat
gagctgggggtgcctcgtcaatga

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