Ogataea parapolymorpha: HPODL_04395
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Entry
HPODL_04395 CDS
T08137
Name
(RefSeq) Topoisomerase 1-associated factor 1
KO
K10997
replication fork protection complex subunit TIMELESS/Tof1/Swi1
Organism
opa
Ogataea parapolymorpha
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
opa03036
]
HPODL_04395
03400 DNA repair and recombination proteins [BR:
opa03400
]
HPODL_04395
Chromosome and associated proteins [BR:
opa03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Fork protection complex
HPODL_04395
DNA repair and recombination proteins [BR:
opa03400
]
Eukaryotic type
Check point factors
FPC (fork protection complex)
HPODL_04395
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIMELESS
Motif
Other DBs
NCBI-GeneID:
25773823
NCBI-ProteinID:
XP_013934668
UniProt:
W1QDY4
LinkDB
All DBs
Position
V:1100532..1103840
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AA seq
1102 aa
AA seq
DB search
MDSSSDRGLEDDLDFDNDFQHTPLSDYEAGEATKQSGAFDAAKFELEAQQALKSQILILC
SALGGADDTGKYVLGADALACLKDIKRWIKVVDDASDTWNVASACDDNGLVVNDLVPILV
QLPARAVDANRTFYHNILLAALELLVALTRPLVLDTERASAAKIDLYIKLKKSHVRYKDR
ILNYEAGRCLKSVVGLTIPILSTPRDQRSPKDTVILNLCLNLFRNVLRIEPADTTVGTRR
STSKTQQVNDNMPNGVSREDISFSHTVCVFRENKVLRFVQTITAGLGREFDERVLGSVCL
DTYFYLLYGLDPATVAVQPTDGARGGAASVLTLGSALEHEKLLKKKLLSNNVTRHANFGT
LLSIRQGDEPVLTVSGQTRLIHADLLEQLDAGVSKKAVAARQTANKNESTRSDFDRRLGA
ERAKQLSRDAHGVVREFCTDFVEAGFGPLLRALRRVVLGERTSFAAFVEFHFFYVVSWVL
KYERLLREHHADHVFRLGYVQDALSHDMLRLVVKNSLPLYLQNREHSLLRVAVGCFREML
LTVVDMHRLRPEDYSGLSPEQQDELDAYTAAAEQLLRLTFSAEDDIEVLFHVVHDAHKVS
LAHALDMIEYTHVLLKVLQYLADLPTPLAMGRKRRGRSQQQQQDSDSDSMDDARLKRYLQ
FDRARYEVYERKLLHERVVGCYVSVFAKFGELSEPQMRRCISYFNRIMLKKDEHFFKLLR
LDFMLALHDIKDAVFGPAVRRDLGRLLGYYMHTLEKKWAQTDAVLLDLLTLGQDHDRGVR
AYLETGDLDEWRAREHAQRGADVAFATPGLSYSHKVSVLASALVYRDHGSLLETLTALLR
TRDDDELVLDDRAALRSGVFRLLLATVGFRLAPGRAVLPRDADAGHVTATVELLEQAREQ
PLESDEVEAELVEEGQEPREQRDDDSARFDDLGSDNDLETLNRVSETIDRLDVLEAALEK
NTGKRRRDPEADKVRFAAAGRKRKGRATKTKRRKSAPKHDGPKQHLSSKYVDSDDDASDA
EKEAEFFRREEQLQALIQANGGVISPEQFQRLLGGGGQQRSMVDLSENEESSLSGSESEG
STQGSGVPARRGRAVIDEDEDE
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atggattcatcttcagaccgaggcctggaggacgatttggacttcgacaacgacttccag
cacacgcctttgtcggactatgaggctggtgaggccacaaagcagtctggtgctttcgac
gcggcgaaattcgagctcgaggcccagcaggccctcaagtcccagattctcatcctgtgt
tctgcgctaggcggggcggacgacaccggcaagtacgtgcttggtgccgacgcgttggcg
tgtctgaaggatatcaagcgctggatcaaggttgtggacgacgcgtcggacacctggaac
gttgcctctgcgtgcgacgacaacggcctggtggtgaacgatctggtcccgattttggtt
cagctgccggcccgggccgtggatgcgaacagaacattctaccacaacatcctgctggcc
gccctggagcttttggtggcgctgacacggccgctggtcctggacacggagcgggcctct
gcggcgaagatcgacctgtacatcaagctgaaaaaatcacacgtccggtacaaagaccgc
attctcaactacgaagctggacgatgtctgaaaagcgttgtggggctgacaatccccatc
ctgagcacgcctagagaccagcggagccccaaggacacggtgatcctaaatctgtgtctg
aatcttttccgcaacgtgctgcgcatcgagccggcggacacaacggtggggacgcggcgc
agcacttccaagacgcagcaggtcaacgacaacatgccgaacggcgtgagcagggaagat
atcagtttctcgcacacggtgtgcgttttccgcgaaaacaaggtgctgcggtttgtgcag
acgatcacggcaggactgggacgcgagtttgacgagcgcgtgctcggcagcgtgtgtctc
gacacctacttctacctgctctacggtctcgacccagccactgtggcggtgcagccgacc
gacggtgcgcgtggcggtgcagcttccgtgctgactcttggctccgctctggagcacgaa
aagctactcaagaaaaagctgctgagcaacaacgtgacgcgccacgccaacttcggcacg
ttgctgagcattcggcagggcgacgagcccgtgctgacggtgtcgggccagacacggctg
atccacgccgacctgctcgagcagctggacgccggcgtttccaagaaggccgtggcggcg
cggcagacggccaacaagaacgagagcacgcggtcggactttgaccggcggctgggcgca
gagcgtgcaaaacagctctcccgcgacgcacatggcgttgtccgtgaattttgcaccgat
tttgtggaggccgggttcggcccgctgctgcgcgcgttgcggcgcgtcgtgctaggcgag
cgcacctcgtttgccgcgtttgtggaattccacttcttttacgtcgtttcgtgggtgctg
aagtacgagcgactgctccgtgaacaccacgccgatcacgtgttccggctcggctacgtc
caggacgcgctgagccacgacatgctgcggctcgttgtcaagaacagcctgccgttgtac
ctccaaaaccgcgagcacagtcttttgcgcgtcgctgtcggctgtttccgcgagatgctg
ctcaccgtcgtggacatgcaccgcctgcggccggaggactactccggcctctcgccagag
cagcaggacgagctggacgcgtacacggctgcggccgagcaactgctgcggctgacgttc
tccgccgaagacgacatcgaggtgcttttccatgtcgtccacgacgctcacaaggtgtca
ctggcgcacgcgctcgacatgattgagtacactcatgtgctgctcaaggtgctgcagtac
cttgcggacctgccgacaccgctcgcgatgggcagaaaacgccgtggccgctcgcagcag
cagcagcaagactccgactccgacagcatggacgacgcgcggctgaaacggtatttgcag
ttcgaccgcgcgcgctacgaggtgtacgagcgcaagctgctgcatgagcgcgtggtgggc
tgctacgtgtctgtctttgccaagtttggtgagctgagcgaaccgcaaatgcgcagatgt
atctcctatttcaaccgcatcatgctgaaaaaagacgagcactttttcaagctgctacgg
ctcgatttcatgctggctctgcacgacataaaggacgccgtgtttggccccgccgtgagg
cgcgatctcggccgtctgctcggctactacatgcacacgctcgagaaaaaatgggcccag
accgacgccgtgctgctcgacctgctgacgctcggccaggaccacgaccgcggcgtgcgc
gcatacctggaaacaggcgatttggatgagtggcgtgcacgcgagcacgcacaacgcggc
gccgacgtggcgtttgcaacaccaggcctgtcgtactcgcacaaggtgagcgtgcttgcg
agcgcactcgtgtatcgcgaccacggcagtctgctggagacgctgacggcgctgctgcgg
acacgtgacgacgacgagctcgtgctggacgaccgcgcggcgctgcgcagcggcgtattc
cggctgctgctcgccacagtgggcttccgtctcgcgcccggccgcgctgtgctgccccgc
gacgccgacgcgggtcacgtgaccgcgacggtggagctgctggagcaggcgcgggagcag
ccgctggagagcgacgaggtggaggccgagctggtggaggaggggcaggagccgcgggag
cagcgcgacgacgactcagcgcgttttgacgatctcggctcggacaacgacctggagacg
ctgaaccgtgtttcggagaccatagaccggctggacgtgttggaggcggcgctggagaaa
aatacgggcaagagacggcgcgaccccgaggcggacaaagtgcggtttgcggccgccgga
cgcaagcgcaagggccgtgctaccaagacgaagcggcgcaagagtgcgccgaagcacgac
gggccgaaacagcatctgtcgtcgaagtacgttgactcggacgacgacgcgtcggacgca
gagaaagaagccgagtttttccggcgggaagagcagctgcaggcgctgatccaggcgaac
ggcggcgtgatcagtccggagcagttccagcgacttctgggcggtggcgggcagcagagg
agtatggtagacttgagcgaaaatgaggagagctcattgagcggaagcgaaagcgagggc
agcactcaggggtcaggtgtgcccgctcgccgcggccgtgccgtgattgacgaggatgag
gatgagtaa
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