KEGG   Ogataea parapolymorpha: HPODL_04491
Entry
HPODL_04491       CDS       T08137                                 
Name
(RefSeq) RNA polymerase II core subunit
  KO
K03008  DNA-directed RNA polymerase II subunit RPB11
Organism
opa  Ogataea parapolymorpha
Pathway
opa03020  RNA polymerase
opa03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:opa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    HPODL_04491
  09124 Replication and repair
   03420 Nucleotide excision repair
    HPODL_04491
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:opa03021]
    HPODL_04491
   03400 DNA repair and recombination proteins [BR:opa03400]
    HPODL_04491
Transcription machinery [BR:opa03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     HPODL_04491
DNA repair and recombination proteins [BR:opa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      HPODL_04491
SSDB
Motif
Pfam: RNA_pol_L_2 RNA_pol_L SPASM
Other DBs
NCBI-GeneID: 25773919
NCBI-ProteinID: XP_013934771
UniProt: W1QG67
LinkDB
Position
V:1272672..1273077
AA seq 123 aa
MNAPDRFELFILPDGVPKLQITPDSKVPSCVLIKFEREDHTLGNLLKQELANDPQVLFVA
YKVEHPLFANFVMRLQTEEGYKPRIALKNACTRLISKLGILNDKFKREWELKALLAEGES
DDI
NT seq 372 nt   +upstreamnt  +downstreamnt
atgaacgccccagatcggttcgagctattcatccttcccgatggagtgccaaagcttcag
atcacaccggactcgaaagtgccgagctgtgtgctcataaagttcgagagagaggaccac
acgctgggcaacttattaaaacaagaactcgccaacgacccacaggtgctctttgtggcc
tacaaagtggaacatcctttgtttgccaactttgtgatgagattgcaaacagaagaaggt
tacaaacctcggattgctcttaagaacgcatgcactagactgatctcgaaactgggcatt
ctcaatgacaaattcaaacgcgagtgggagctgaaggccttgcttgccgagggcgagtcg
gacgacatataa

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