KEGG   Ogataea parapolymorpha: HPODL_04643
Entry
HPODL_04643       CDS       T08137                                 
Name
(RefSeq) WD40 repeat-containing protein
  KO
K12816  pre-mRNA-processing factor 17
Organism
opa  Ogataea parapolymorpha
Pathway
opa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:opa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    HPODL_04643
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:opa03041]
    HPODL_04643
Spliceosome [BR:opa03041]
 Complex C
  Other components
   Step II factors
    HPODL_04643
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_IFT122_1st WD40 Beta-prop_WDR3_1st WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_EML_2 WD40_CDC20-Fz WDR55 EIF3I WD40_Gbeta WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_NOL10_N ANAPC4_WD40 Beta-prop_Aladin Beta-prop_TEP1_C Beta-prop_EIPR1 NBCH_WD40 WD40_MABP1-WDR62_1st ASA1 DSE1_N PAC11 WDR90_beta-prop_4th Beta-prop_WDR41 Beta-prop_SPT8 WD40_RFWD3 Beta-prop_ACSF4 Beta-prop_DCAF12 Beta-prop_SCAP Beta-prop_WDR75_2nd SdiA-regulated Androgen_recep
Other DBs
NCBI-GeneID: 25774070
NCBI-ProteinID: XP_013936458
UniProt: W1QJ47
LinkDB
Position
II:complement(<201373..>202839)
AA seq 488 aa
MSLLGYASDSDDDANSQMSLVPAPVSESRKEPETQKSNGKRTITGFVETEVVDGLKFQRN
KRLYEQGPKDPENEQTKSRKQRAKELKRRRKNKGDPGELDGENAYRGPWASYSESEDDGE
LEEEEVQAPLEAASENGSEEEQTEEETTTFYGDSQYDYLGRTYMHVPNDVQTNLHKEPGS
QRCYVPKKKIHTFAGHARGVQCLQFFPNSGHLLLTCGNDSSIKLWDVYHKRKLLRGFYGH
MKPVKCVTFNSSGSHFLSCSYDETVKLWNTETGECEFKKKLDGIPNVVRYIPDNDNEFLV
GMSNKRIDHYDLKTGDVIQSYEHHTDAVNSLEFINDGENFVSSSSDKSLRIWEVKVNMPV
KLIADPKQFSMPFLKVHPKGFAFVAQSSDNTIQTFAASAEDKFKRNRDKTFTGHNSANYS
IGLQFTPDGRTLMSGDSHGFAFFWDWRSTELISKLKVSSKPITCIDSHPQESSMVALAGA
DGKVYLYD
NT seq 1467 nt   +upstreamnt  +downstreamnt
atgtctctgctaggatacgccagcgactctgacgacgatgccaactcgcaaatgagcctt
gttcccgcgcctgtttcagagagccggaaggagccagaaacacaaaagtcaaacggaaaa
cggacaatcacaggctttgttgagacagaagtggtagacggcctaaaatttcagagaaat
aaaagattatacgaacagggaccaaaagacccagaaaacgaacaaaccaagtcccgaaaa
cagcgtgcaaaagaattgaaaagacgtcggaagaataaaggagatccaggggagctggac
ggtgaaaatgcatacagaggaccttgggccagctacagcgagagcgaagacgatggtgaa
ctagaggaagaagaagtgcaggcaccattagaagcagcctccgagaacggatcagaagaa
gaacaaactgaggaagaaaccaccaccttctacggtgactcgcaatatgactatctcggg
agaacgtatatgcacgttcctaacgacgtgcaaaccaacttacataaggagccaggaagc
cagcgctgctacgtgccgaaaaagaaaatacacacatttgccggacacgcacgaggtgtc
caatgcctgcaattctttcctaatagtggccatttgctgcttacctgtggaaacgactcg
tcaatcaaattatgggatgtatatcataaacggaaattgcttagaggattctatggacac
atgaagcctgtgaaatgcgtgacgttcaattcctcggggtctcactttttgagttgctcg
tacgacgaaacagtcaagctgtggaacacagagaccggcgagtgcgaattcaaaaaaaaa
ctggatggcattcccaacgttgtcagatatatccccgacaatgacaacgagtttctggtt
ggcatgtccaacaaaagaatcgatcattatgatctgaaaacaggcgacgtgatccagtcg
tacgagcaccacacagacgcggttaacagtctcgagttcattaacgatggggaaaatttt
gtgtcttcgtcgagcgacaagtcgctgcgcatctgggaagttaaagtcaacatgcccgta
aaactcatagccgaccccaaacagttttccatgccgtttttgaaagttcatcctaaaggt
ttcgcgtttgtcgcacaatcttccgacaacaccatccaaacatttgcagccagcgccgaa
gacaagttcaagcgaaacagagataaaacattcactggtcacaactccgccaattactcc
attgggctgcagtttacgcccgacgggagaactttaatgagcggcgactcgcacggattt
gcatttttctgggactggaggtccacagagctgatctccaagctcaaggtcagctccaag
ccgataacctgcatcgattcacatccccaagaaagtagcatggtggctctcgcaggagcc
gatgggaaggtgtatttgtacgattga

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