Ogataea parapolymorpha: HPODL_04643
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Entry
HPODL_04643 CDS
T08137
Name
(RefSeq) WD40 repeat-containing protein
KO
K12816
pre-mRNA-processing factor 17
Organism
opa
Ogataea parapolymorpha
Pathway
opa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
HPODL_04643
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
opa03041
]
HPODL_04643
Spliceosome [BR:
opa03041
]
Complex C
Other components
Step II factors
HPODL_04643
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40
Beta-prop_WDR3_1st
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
EIF3I
WD40_Gbeta
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_NOL10_N
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_TEP1_C
Beta-prop_EIPR1
NBCH_WD40
WD40_MABP1-WDR62_1st
ASA1
DSE1_N
PAC11
WDR90_beta-prop_4th
Beta-prop_WDR41
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_ACSF4
Beta-prop_DCAF12
Beta-prop_SCAP
Beta-prop_WDR75_2nd
SdiA-regulated
Androgen_recep
Motif
Other DBs
NCBI-GeneID:
25774070
NCBI-ProteinID:
XP_013936458
UniProt:
W1QJ47
LinkDB
All DBs
Position
II:complement(<201373..>202839)
Genome browser
AA seq
488 aa
AA seq
DB search
MSLLGYASDSDDDANSQMSLVPAPVSESRKEPETQKSNGKRTITGFVETEVVDGLKFQRN
KRLYEQGPKDPENEQTKSRKQRAKELKRRRKNKGDPGELDGENAYRGPWASYSESEDDGE
LEEEEVQAPLEAASENGSEEEQTEEETTTFYGDSQYDYLGRTYMHVPNDVQTNLHKEPGS
QRCYVPKKKIHTFAGHARGVQCLQFFPNSGHLLLTCGNDSSIKLWDVYHKRKLLRGFYGH
MKPVKCVTFNSSGSHFLSCSYDETVKLWNTETGECEFKKKLDGIPNVVRYIPDNDNEFLV
GMSNKRIDHYDLKTGDVIQSYEHHTDAVNSLEFINDGENFVSSSSDKSLRIWEVKVNMPV
KLIADPKQFSMPFLKVHPKGFAFVAQSSDNTIQTFAASAEDKFKRNRDKTFTGHNSANYS
IGLQFTPDGRTLMSGDSHGFAFFWDWRSTELISKLKVSSKPITCIDSHPQESSMVALAGA
DGKVYLYD
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgctaggatacgccagcgactctgacgacgatgccaactcgcaaatgagcctt
gttcccgcgcctgtttcagagagccggaaggagccagaaacacaaaagtcaaacggaaaa
cggacaatcacaggctttgttgagacagaagtggtagacggcctaaaatttcagagaaat
aaaagattatacgaacagggaccaaaagacccagaaaacgaacaaaccaagtcccgaaaa
cagcgtgcaaaagaattgaaaagacgtcggaagaataaaggagatccaggggagctggac
ggtgaaaatgcatacagaggaccttgggccagctacagcgagagcgaagacgatggtgaa
ctagaggaagaagaagtgcaggcaccattagaagcagcctccgagaacggatcagaagaa
gaacaaactgaggaagaaaccaccaccttctacggtgactcgcaatatgactatctcggg
agaacgtatatgcacgttcctaacgacgtgcaaaccaacttacataaggagccaggaagc
cagcgctgctacgtgccgaaaaagaaaatacacacatttgccggacacgcacgaggtgtc
caatgcctgcaattctttcctaatagtggccatttgctgcttacctgtggaaacgactcg
tcaatcaaattatgggatgtatatcataaacggaaattgcttagaggattctatggacac
atgaagcctgtgaaatgcgtgacgttcaattcctcggggtctcactttttgagttgctcg
tacgacgaaacagtcaagctgtggaacacagagaccggcgagtgcgaattcaaaaaaaaa
ctggatggcattcccaacgttgtcagatatatccccgacaatgacaacgagtttctggtt
ggcatgtccaacaaaagaatcgatcattatgatctgaaaacaggcgacgtgatccagtcg
tacgagcaccacacagacgcggttaacagtctcgagttcattaacgatggggaaaatttt
gtgtcttcgtcgagcgacaagtcgctgcgcatctgggaagttaaagtcaacatgcccgta
aaactcatagccgaccccaaacagttttccatgccgtttttgaaagttcatcctaaaggt
ttcgcgtttgtcgcacaatcttccgacaacaccatccaaacatttgcagccagcgccgaa
gacaagttcaagcgaaacagagataaaacattcactggtcacaactccgccaattactcc
attgggctgcagtttacgcccgacgggagaactttaatgagcggcgactcgcacggattt
gcatttttctgggactggaggtccacagagctgatctccaagctcaaggtcagctccaag
ccgataacctgcatcgattcacatccccaagaaagtagcatggtggctctcgcaggagcc
gatgggaaggtgtatttgtacgattga
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integrated database retrieval system