Ogataea parapolymorpha: HPODL_04776
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Entry
HPODL_04776 CDS
T08137
Name
(RefSeq) UFD2 Ubiquitin chain assembly factor
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
opa
Ogataea parapolymorpha
Pathway
opa04120
Ubiquitin mediated proteolysis
opa04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
HPODL_04776
04120 Ubiquitin mediated proteolysis
HPODL_04776
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
opa04121
]
HPODL_04776
Enzymes [BR:
opa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
HPODL_04776
Ubiquitin system [BR:
opa04121
]
Ubiquitin ligases (E3)
U-box type E3
HPODL_04776
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
KAR
Motif
Other DBs
NCBI-GeneID:
25774201
NCBI-ProteinID:
XP_013936599
UniProt:
W1QJG3
LinkDB
All DBs
Position
II:complement(440608..443780)
Genome browser
AA seq
1041 aa
AA seq
DB search
MSDPEEIRAKRLARLAALSNEPSQPKPKKIASPVTPSPVASSVVKPFDKSVSSTREPSIS
GSSSPERRQTESIEDWINTKLEFILQATLSKQKALKYTYLESMAQELQTFNTDSIDSILL
DILTERGIDSTKYETPFEYLSDCWSKAKSVRRLIKNDEPSKETKLHLIDEVIRLTSSYSL
LLFQVPDMYVDEVKLDVIVRQLWSSINKYDTFLMDIISRSIDNDSVLDFLNVFLPHLSQQ
LLSLNYSTDTDYSKILTVYQILVSNKTIASQLYLVDGFHPEGLKANEFELKTILGPVLRV
SPLLPEVAVSNYPEGLTKIQIKNVHESLHSEQVVLINRLFGICDKIVRSGEACRTAFLKL
LAEIVNKNHLRRGEHANPKKLASDSFMFCITMVLVKLSQPFLSDGIKIDKISMDYLSRRN
KLLDLKEETKINSTIQEYEEHYPEDSLSDEPLNFISECFFLMLSYLQYGFGGMIINSERL
SNHVKQLTQELAKLEEMLQKTSTDNANPLAKMLADTRLKPLKKELQKLKSMKLSIDMCSL
NRELQLEIFDVINGAIKFFIRLIEPTHSYPNIALKIPFNKFDDDVDKFDDFEYLRSIAPV
PFKYYPEIFIEGIVNYCHYIAKFSNNPMLQNEKQLNQFIEFAIIILRCPELVNNPHLKAR
LTEVLFFGSLPMANNMDGYMVHIFNNNDLVKENLLISLLDFYVMVEKTGASSQFYDKFNA
RCHISMILEQLWKFDFYRADLRRISKNQKFFVRLIARMLNDTTYLLDESLNHLHTIGTCQ
REIASRKKGNSPATEESDEDLNKKLQESERMAKSLVQLSNKTIQLFDLFTKEIPSAFYIV
EIVDRLAGMLNYNLVALVGPRCNELRVQDPETYHFNPSELLLHICSIFINLSNGQEFVEA
VARDSRSFSPACFKRAIQILNKVGKIDVEFSTKLNSFVEQAEKVKVEDEEEELELGEIPD
EFLDPLMFTLMKDPVKLPQSKVSMDRSVLKAHLMNDPTDPFNRTPLKLEDVAEDTELKNK
IEQFIKERRRHRDSQGDVNME
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatccggaagagattcgtgccaagcgattggccaggcttgcggccctatcaaac
gaaccgtcgcagccaaaaccgaaaaaaatcgccagtccagtgactcctagccctgtcgcg
tcgtctgtcgtgaaacctttcgacaaatcggtgtccagtacccgcgagccttcaatcagc
gggtctagctcaccagagagaagacaaaccgagtcgatcgaagattggatcaacacgaaa
ctcgagtttattctacaggccactttgtctaaacaaaaagctttaaagtacacgtacctg
gaatcgatggctcaggagttgcagacattcaatacagactcgatcgatagcatcctgcta
gacattttgactgagaggggaattgattccaccaaatacgaaactccgtttgagtacctg
tccgattgttggagtaaggccaaaagtgttcgcagattgatcaaaaatgacgagccgagc
aaggagactaaattacaccttattgacgaagtcatcaggctgacttcaagctactcgctc
ttattgttccaggttcccgacatgtatgttgacgaggtcaagctggacgtgattgttcgc
caattgtggtcttccatcaacaagtacgatactttcctaatggacatcatatccagatcg
atcgacaatgacagtgttctagacttcctcaatgttttccttccgcatctgtctcaacag
cttttgagtctaaactactccaccgacaccgactactccaaaatcttgacggtttatcag
atattggtctccaacaagaccattgcctcgcagctctacctagtggacggattccaccca
gaagggctcaaggccaacgagtttgagctgaagaccattcttgggcccgtgcttagagtg
tctcctttgttacccgaagtcgcagtttcgaactatccagaaggactcactaaaattcaa
atcaagaatgtccatgaatctcttcacagtgagcaggtggttttgatcaacagattattt
ggaatttgcgacaagattgtgaggtctggagaagcgtgtcgtacagcgtttcttaaacta
ttagctgagatcgtgaataagaaccatctgagaagaggagagcacgccaatccgaaaaaa
ctcgcttcggactcattcatgttctgcatcaccatggttcttgtcaagctttcacaaccc
tttctgtctgatggaatcaagatcgacaaaatctcaatggactatctaagtcgccgcaac
aaacttttggacctgaaggaggaaaccaagattaattccactatccaagaatatgaagaa
cactatcctgaagacagtctttctgacgagccattgaactttatatctgaatgcttcttt
ttgatgctcagctatctgcagtacggttttggaggtatgattatcaattcggaaagactt
tccaatcatgtcaaacaacttacacaggaactcgcaaaattggaggaaatgctacaaaaa
acctctactgataatgcaaacccgctagccaagatgcttgccgataccagactcaagcct
ctgaaaaaagagttgcagaaactgaagtcgatgaaactgtccatcgacatgtgctctttg
aacagggagttgcagcttgagatttttgacgtgatcaacggagcaatcaagttcttcatc
aggcttattgagcctactcacagctatccaaacattgcactcaaaataccattcaataag
tttgatgacgatgtcgacaagttcgacgactttgagtacttgagaagcattgctcctgtg
ccattcaaatactaccctgaaatctttattgagggcatcgtgaattactgccattatatt
gcgaaatttagcaacaatccaatgctacagaacgaaaaacagctaaatcaattcatagag
tttgcaataatcatcctcagatgtcctgaactggtcaataacccacatttgaaggccaga
cttacagaggttctattttttggctctttgcctatggctaacaacatggatggatacatg
gtccatatcttcaacaataacgatcttgtcaaggaaaatctgctgatttctttactagat
ttctatgtgatggtggaaaaaacgggcgcatcctctcaattctatgacaagttcaatgcc
agatgtcacatttcgatgattttagagcaattgtggaaatttgatttttacagagctgat
ctgagacgcatctcgaagaaccagaaattctttgtgcggctcattgcacgtatgctgaac
gacacaacctacttgctagacgagtcattgaaccatctgcacaccattggaacgtgtcaa
cgggagatagcatcgcgcaaaaagggaaattctcccgccacggaagaaagcgatgaggat
ctgaacaagaagttgcaggaaagcgagagaatggccaagtctctagtccagctatccaac
aagacgatacaattgtttgatttgttcacgaaggagattccttcggctttctacattgtg
gaaattgttgatagactcgctggtatgctcaactacaacctggttgccctggttgggcca
cgatgcaacgagttgagggtgcaggaccctgaaacataccatttcaatccctcagagctg
ctgctacacatttgctcgattttcatcaatctttctaacggccaggagtttgtggaggct
gttgccagagactcgagatctttcagtcctgcttgtttcaaacgtgcgattcagattctc
aacaaagtcggcaaaattgacgtcgaattcagcactaaactgaacagctttgttgagcaa
gctgaaaaggtgaaggttgaggacgaggaggaagagttggagcttggagaaattccagac
gagttcctcgatccgctcatgttcaccttgatgaaggacccggtgaagcttccgcagtcc
aaggtgagcatggaccggtctgttctcaaggcgcatttgatgaacgatccaacggatccc
ttcaatcgtacgccgttgaagcttgaagatgtggctgaggacactgagctgaaaaacaag
atcgagcaatttatcaaggagcgccgtcgacacagagacagccagggcgacgtgaacatg
gaataa
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