Ogataea parapolymorpha: HPODL_04793
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Entry
HPODL_04793 CDS
T08137
Name
(RefSeq) Nucleoporin GLE2
KO
K14298
mRNA export factor
Organism
opa
Ogataea parapolymorpha
Pathway
opa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
HPODL_04793
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
opa03019
]
HPODL_04793
03036 Chromosome and associated proteins [BR:
opa03036
]
HPODL_04793
Messenger RNA biogenesis [BR:
opa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
HPODL_04793
Chromosome and associated proteins [BR:
opa03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
HPODL_04793
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR75_1st
Beta-prop_SPT8
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_EML
Beta-prop_HPS5
Beta-prop_EIPR1
WD40_like
WDR90_beta-prop_4th
WD40_RFWD3
Beta-prop_Vps41
Pep3_Vps18
Motif
Other DBs
NCBI-GeneID:
25774216
NCBI-ProteinID:
XP_013936618
UniProt:
W1QJK5
LinkDB
All DBs
Position
II:complement(472278..473393)
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AA seq
371 aa
AA seq
DB search
MSFGTRSLGAFGTSSLGGSSGTGTVTSAGTLQDLQNDIVVPNGPEDSISDLAFSPVAEFL
AVSSWDRKNRIYEINTGTGQVEGRALYEHEGPVLSTRFSLDGARVISGGADKQVRLFDLA
SQQQQTIGLHNDTVRVVRYVECGPTNTQCVVSGSWDKTIKYWDMRQQNPICTLNMPERVY
AMDSSQKLLVVGTAERHIVTIDLNNPDKIFRQSMSPLKYQTRTIACYPKGDGFAVGSIEG
RCGIQYVDELQQKEFGFSFKCQREQKTASKEVNIYSLNSIAFHPVHGTFATAGSDGTFNF
WDKDARHRLKGYPPLGATIPVVGFNRTGTIFAYALSYDWSKGHEFNRPDYPNVVRLHPCK
EEEVKQRPKRK
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttggaactcggtcactaggagcgtttggcacgagctccctaggcgggtcttcg
gggaccgggactgtgacgtctgctggaactctccaggacctgcaaaatgacatcgtggtc
cccaatgggccggaggactcgatttcggatcttgcgttttcgcctgtcgctgagtttctg
gccgtgtcgtcgtgggaccgtaaaaacagaatctacgagatcaacacggggacaggacag
gtagaggggcgcgcgctgtacgagcacgagggccccgttttgagcacgcggttttctctg
gacggtgcgagggtgatcagtggaggagctgacaagcaggtgcggctgtttgatctcgcg
tctcagcagcagcagacaataggactacacaacgatacggttagggtggtgcggtatgtg
gagtgcgggcctactaacacacagtgtgttgtgagtggctcgtgggacaagaccatcaag
tactgggacatgaggcagcagaacccgatttgcacgctcaacatgcctgagcgcgtgtac
gcgatggactcgtcgcagaagttgcttgttgttggcactgctgagcgtcacattgttaca
attgacttgaacaatccggacaagatcttcagacagagcatgtcaccgctcaagtaccag
acgagaacgatcgcgtgctatccgaagggtgatgggtttgcggtggggtcgattgagggc
cgttgcggtatccagtacgtggacgagctgcagcagaaggagtttgggttctcgttcaaa
tgtcagagagaacagaagacggcgtcgaaggaggtgaacatatattctctcaactcgatt
gcgttccaccctgtgcacgggacatttgccactgccggctcggatggaacgttcaacttc
tgggacaaggacgcacggcacagactaaagggctatccgccgctgggtgctactattccg
gttgtcgggttcaaccgcacaggaacgatctttgcgtacgccttgagctacgactggagc
aagggccacgagtttaaccggcctgactaccctaacgtggtgagactgcacccttgcaag
gaggaagaggtcaaacagcggccaaaaagaaagtaa
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