Ogataea parapolymorpha: HPODL_04841
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Entry
HPODL_04841 CDS
T08137
Name
(RefSeq) Chromatin structure-remodeling complex subunit SFH1
KO
K11770
chromatin structure-remodeling complex subunit SFH1
Organism
opa
Ogataea parapolymorpha
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
opa03021
]
HPODL_04841
03036 Chromosome and associated proteins [BR:
opa03036
]
HPODL_04841
Transcription machinery [BR:
opa03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
RSC complex
HPODL_04841
Chromosome and associated proteins [BR:
opa03036
]
Eukaryotic type
Chromatin remodeling factors
RSC complex
HPODL_04841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
PBP1_TM
Motif
Other DBs
NCBI-GeneID:
25774264
NCBI-ProteinID:
XP_013936667
UniProt:
W1QLE7
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Position
II:complement(559481..560617)
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AA seq
378 aa
AA seq
DB search
MDRPIYPQALSTSLVARLKNSPNPLFIASLPARGSKRAASTRVNYAEDFDMELEDDQDQD
YDEDGALVSRSNTNGPGMSMAFLQGKDAPREKYKTVFSEAENLANCSVPEQLVPIKLNIE
TSGTRVNDMFMWNLNESLITPELFATIMCQELDLPKYSEATIAGQIRDQLESYRAVATVP
MPQLSQEKELHAILDISISLDNTLYEDKIEWDILNSAITPEEFARTVVADMGLRREFQNA
IAISLHDAIFKLKKEFLENPQQILFNNESLPLLNKVYQPPAPDTGNGSPGVVSLELQGMR
FDSKKYGADFSPRVETLTPWEIEKREIERERNIRRLKRETMRVSGIGSSMMAPAPANDRN
ANSKRKYDELEGTWKFDK
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggacaggcctatttatccccaggcgctgtcgacgtcgctggttgcgcggctgaaaaac
tcgccgaacccgctctttattgcgtcgctgcccgccagaggctccaagagagccgcctcg
acccgtgttaactacgccgaagacttcgacatggagctcgaggacgaccaggaccaggac
tacgacgaggacggggctctggtttcccggtcgaacacgaatggtccaggcatgagcatg
gcgtttttacagggcaaagacgctcctagagaaaagtacaagacggtgttcagcgaagct
gagaacctggccaactgctccgtccctgagcaattggtgcccattaaattgaacatcgag
acgagcgggacgcgcgtgaacgacatgtttatgtggaacttgaacgagtcgctaattact
cccgagttgtttgcgactattatgtgtcaggagctggatctgccgaaatacagcgaggcc
accatcgcaggccagattcgtgaccagctggagtcgtatcgcgcggtcgcgaccgtgccg
atgccgcagctgtcgcaggaaaaggagctgcatgcgattctggacatttcgatcagcctc
gacaacacgctctacgaagacaagatcgagtgggatatcttgaacagcgccatcacgccg
gaggagtttgcgcgcaccgtggtggcggatatgggtcttcgccgggagttccagaatgcc
atcgcgatctcgctacacgacgccattttcaagcttaagaaggagttcttggagaatccg
cagcagatcctgttcaacaacgagagtttgccgctgctcaacaaggtataccagccgcct
gcgccggacacgggcaacggctcgcccggcgtggtctcgctcgagctgcagggcatgcgg
ttcgacagcaagaagtacggagcagacttcagtcctcgcgtggaaacccttacaccgtgg
gagatcgagaagcgggagatcgagagagagcggaatatccggcgtctcaagagagaaaca
atgcgtgtgagcgggataggaagttctatgatggctcctgcgccagcaaacgatagaaac
gccaactcgaagcgcaagtacgacgaattggaaggaacgtggaaattcgataaataa
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