Ogataea parapolymorpha: HPODL_04847
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Entry
HPODL_04847 CDS
T08137
Name
(RefSeq) Cohesin subunit SCC3
KO
K06671
cohesin complex subunit SA-1/2
Organism
opa
Ogataea parapolymorpha
Pathway
opa04111
Cell cycle - yeast
opa04113
Meiosis - yeast
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
HPODL_04847
04113 Meiosis - yeast
HPODL_04847
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
opa03036
]
HPODL_04847
Chromosome and associated proteins [BR:
opa03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
HPODL_04847
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SCD
STAG
SCC3_C
Cnd1
DUF2937
Flagellin_N
Motif
Other DBs
NCBI-GeneID:
25774270
NCBI-ProteinID:
XP_013936673
UniProt:
W1QJR5
LinkDB
All DBs
Position
II:complement(569141..572248)
Genome browser
AA seq
1035 aa
AA seq
DB search
MSTRRSTRLQAHPDRSLNYSVDLSDSESSGASEKENEYQPNKRAARKPNKTSRGPKRRKT
VPNNIDQLENFQENPIFETLSHAEVAVAELAASWLDQFEEDKYDAVKDMLNFVLRACGCV
TLVAKHDVANADSSKETVAEIQAMFEKQGSHEYPLGLAGNSKNANWRDFKKRCLEFVDQV
LVAASEQGILYEDDELVELLVTWLGALTTSNARPLRYASTLLCLQMETTLCSLVAQTSTA
VNRAQRQLTNEQRNIDNLLKKARSGAKLAAAKDRAAQIEQNCQLYSEHKTYLETFLQDIF
NTTFAHRYRDTDAQIRQECVRHLSYWIDLYPEFFFESIYIRYLGWLMTDQDVAVRHEVLR
VVLRLYQTQSMVAALRQFTSHFKEKLIEMAFYEADTRVRSSCVQVLTEISRMGFLDTEEV
VKVASLIFVDDEDLICQKGKTATRLIKDLAKFIATVEAQSLAEFMESNSATVEKVAGSLE
LSVKDLLKFHGVSQMLVEAETYYNSDVATKAVKMRSYNSRTAKLVRVCQNLFALPRYHAD
GALETLCGYILYDFSANAEIAKIQHSVELSHAQTFFVLGLISAAATIYCEADANEFHQQL
FPKKHDDQTNDRMLYLGKLVAQLDSLFDVCKKTHLAVFLGLFTQLVKHRVCETLDQTETE
TKITAQLLKTFREDQLSSYTPESPEYYNSINFQFAQLFEHINTDMVEVSLKVDEVAQELA
EELTLAIKDADRLQVGSTLCKLMLLRGSATKSRLLTQLMPLIDDICSCTASLPLSDELDQ
LVASNKASEYFSCLLFLVAENLETLTNKLKVDPDAEVLDELHRHLSPLAPVKRALLELVA
SRAQNINFWYAVCNLYLDVFTTLNLLKYYVGPHRDVLDHFFDTEMSVEPLSSSQECLLQL
FLILEAQVASEKQVELDRTEHEDVNFETAQMDDCERKLCTFVAKLMLLDKTVGLETSIVS
RVKLNRAVLGSLFNEVLDYEQVEMKEEEELPKELPQEQQEQQEQQEPLEQSSDQFLHTNT
SVPNLLPEPVPDLVL
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgtctacaagaagatccacccggcttcaggcccatcccgaccggtcgctgaactactcg
gtcgacctgtctgatagcgagtcgagtggggcaagcgaaaaggagaacgagtaccagcca
aacaagcgtgctgcgcgtaaaccaaacaagacttcgcgcggccccaagagacgcaagacc
gtgccaaataacatagaccagctcgaaaatttccaggaaaaccccatttttgagacgctg
agccacgcagaagtggccgtagccgagctggctgcctcgtggctcgaccagttcgaggag
gataagtacgacgcagtcaaggatatgctgaactttgttttgagagcgtgcgggtgcgtg
acgcttgtggcgaagcacgacgtggcgaacgcagactcgtccaaggaaacggtagcagag
attcaggcgatgtttgaaaaacagggctctcacgagtatcctttgggtcttgctggcaac
tccaagaacgccaactggagagattttaaaaagaggtgtttggagttcgtggaccaggtt
ttggtggcagcgagcgaacagggcattttgtatgaggacgacgagctagtggagctgctg
gtcacgtggctgggagccctcaccacctcgaacgcgcgacctctgcggtatgcttccacg
cttttgtgtctgcagatggaaacgacgctgtgctcgcttgtggcgcaaacctcgacggct
gtcaaccgtgcacaacgccagctgacgaacgaacaacgcaacatcgacaatttgctgaaa
aaagcccgttcaggtgctaagttggccgctgccaaagaccgtgctgcgcagatcgagcag
aattgccaactatacagcgaacacaagacttatctggagacttttctccaagacatattc
aacaccacctttgctcacagatacagagacaccgatgcgcagatccgccaggagtgcgtg
agacacctgagctactggatcgacctgtacccagagtttttctttgagagcatatacata
cggtatctggggtggctgatgaccgaccaggatgtggcggtgcggcacgaggtgctgcgc
gtggtgctcagactgtaccagacgcagtcgatggtggcagctctgcggcagttcaccagc
cacttcaaagaaaaactcatcgaaatggctttttacgaggcagatacgcgcgtccgcagc
agctgtgtgcaggttctgacggagatctccaggatgggctttttggatacagaggaagtt
gtcaaggtagccagtttgatttttgtcgacgatgaggacctaatctgccagaagggcaag
accgcgacgcgactgatcaaggacctggccaagttcatcgccacagttgaggcgcagtcg
ctcgccgagtttatggagtccaacagtgctactgttgaaaaggtggcaggctcccttgag
ctcagcgtcaaagacttgctcaagttccacggggtgtcgcagatgcttgtcgaggcagaa
acgtattacaactcggacgtggccaccaaagctgtcaagatgcggtcttacaactcacgg
acagccaaactcgttcgtgtttgtcagaacctgtttgctctgccacggtaccacgccgac
ggcgcgctggagaccctgtgtggctatattttgtacgacttctctgccaacgcagaaatc
gccaaaatccagcacagcgtcgagttgtctcacgcacagacgtttttcgtgcttggtctg
atttccgcagcggcaaccatctattgcgaggcggacgcgaacgaattccaccagcagctg
ttcccaaaaaagcacgacgaccagaccaacgacagaatgctgtatctgggcaagcttgtt
gcacagctggactcgctattcgacgtgtgcaagaaaacgcatttggcggtgtttttgggt
ctgttcacccaattggttaaacatagagtctgcgagacactggaccagacagaaacggag
accaaaatcacggcacagctgctgaaaacgtttagagaggaccagctgagctcttacact
ccagagtctccggaatactacaactcgattaatttccaattcgcgcagctctttgaacac
atcaacaccgacatggttgaggtctcgctgaaagttgacgaggtggcgcaggaactcgcc
gaggagctgacactggcgatcaaggacgccgaccggttgcaggttggtagcacgctgtgc
aaactgatgttgttgcgtggctcagccaccaaatcccgactcttgactcaactcatgccg
ctgatcgacgacatctgctcttgcacagcgtcgctgccattatctgacgagctggatcag
ctggtcgcgtccaacaaggcatcagagtatttctcgtgtctgcttttcctagtggcggaa
aacctcgagacactgaccaacaagcttaaggtcgatcctgacgctgaggtgctcgacgaa
ctgcaccgccacctgtcgccgttggcgcctgtcaaacgtgctttgctggaactggttgcg
tcacgtgcacaaaacatcaatttctggtatgccgtctgcaacctgtatctggacgtgttc
accacgctgaacctgctcaaatactacgttggcccgcacagagacgtcctcgaccacttt
ttcgacacagaaatgtctgtcgagccgctttctagcagccaggaatgcttgctccagctg
tttttgattttggaggcacaggttgcttctgaaaagcaggtcgagctggaccgcacagaa
cacgaagacgtgaatttcgaaactgcccagatggacgactgtgagcgcaagctgtgcact
tttgttgccaaactgatgctgctcgacaagacggtcggtctggagacgtccattgtcagc
agagtgaagctcaacagggcagtcctgggaagtcttttcaacgaggttctggattacgag
caagtggaaatgaaggaggaggaggagttgccaaaggagctgcctcaggagcaacaggag
cagcaggagcagcaggagccactagaacaatcctccgaccagttcttgcacaccaacacc
tcggtcccaaacctgctgcccgagccggtgcccgacctcgttttataa
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