Ogataea parapolymorpha: HPODL_04856
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Entry
HPODL_04856 CDS
T08137
Name
(RefSeq) tRNA (carboxymethyluridine(34)-5-O)-methyltransferase
KO
K15444
tRNA (uracil-5-)-methyltransferase TRM9 [EC:
2.1.1.229
]
Organism
opa
Ogataea parapolymorpha
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
opa03016
]
HPODL_04856
Enzymes [BR:
opa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.229 tRNA (carboxymethyluridine34-5-O)-methyltransferase
HPODL_04856
Transfer RNA biogenesis [BR:
opa03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
HPODL_04856
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_11
Methyltransf_25
Methyltransf_12
Methyltransf_31
Methyltransf_23
Ubie_methyltran
Motif
Other DBs
NCBI-GeneID:
25774279
NCBI-ProteinID:
XP_013936682
UniProt:
W1QLF2
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All DBs
Position
II:583587..584300
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AA seq
237 aa
AA seq
DB search
MSGKIQPSQEEIELETQKFKSTATPELQESLYVHEVYNDIAQHFSQTRYKPWPMVAQFLG
SISDYSLGVDVGCGNGKYLTVNPKLYIVGSDYSTGLLDQAVQLHQRELNDLVVADGMMLP
HETKRFDFAMSIAVVHHFSTKERRVAAIREILRVVRCGGRALVYCWALEQEKSRRGYREG
MEQDILVPWVTKDGTTRMRYYHLYKKGELEEDCVAAGGKIVQSGYEKDNWWVIVERI
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcaaaatacagccctcccaggaggagatagagctggaaacccagaagttcaag
agcacagcgacgcccgaactccaagaaagtttgtatgtgcacgaggtgtacaacgacatc
gcccaacacttctcgcagaccagatacaagccatggcctatggtggcccagtttttggga
tccatctccgactactcgcttggagtggacgtcggatgcgggaacggcaagtacctgact
gtgaacccgaaactgtacattgtggggtcagattattcgactggtttgctcgaccaggct
gtgcagcttcaccaaagagagttgaacgatttggtggtagcagatgggatgatgctgccg
cacgaaaccaaaaggtttgattttgccatgtcgattgcggtggtgcaccatttcagtacg
aaagagaggcgcgtcgcggcgatccgcgaaattctacgggtggtgcgctgcggcggccgt
gccctggtgtactgctgggctttggagcaggagaagtctcgccgcgggtacagagaaggc
atggaacaggatatattggtgccgtgggtgactaaagatggaacaactcgaatgagatat
tatcatttatataagaaaggcgaactggaggaggactgtgtggccgctggaggaaaaatt
gtgcagagcggatatgagaaagacaattggtgggtaatcgttgagcggatatag
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