Ogataea parapolymorpha: HPODL_04893
Help
Entry
HPODL_04893 CDS
T08137
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
opa
Ogataea parapolymorpha
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
opa03041
]
HPODL_04893
Spliceosome [BR:
opa03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
HPODL_04893
Other components
Complex C specific factors
HPODL_04893
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
25774316
NCBI-ProteinID:
XP_013936719
UniProt:
W1QJV0
LinkDB
All DBs
Position
II:complement(<647787..>649625)
Genome browser
AA seq
612 aa
AA seq
DB search
MFNPLQFQRRRRASEDDDSSEDERPGLGRPKDIADEQPLTDVDRQYGIGASLLRQMGYVE
GKGLGKAEQGIVAPIETKMRPRGLGIGGFDEKSPEEVSSDDEPISEVAFESTLPSLYSLI
EQFEQLGTTVPVKIKEMCDNGFETVEIRTALAGMLEQLKDVQAKIDFAQHELEQQRKIEA
VSRERRLALQRVLDGNHGMIEDDEDREMAAKMLMAKLEPLVRELMDSWDPTNLDSNVPDR
LLEYKSEFSLFESDHDNAYQALVSQLWEKKAGEFYATKWSVWQPNLGIALIEDFQELVSE
AAVARMYETVLLPKFKDEISHWKIEEPGPETWLTDWLNVMDERLVDQVVANIFQKYADWI
LLGWNIEEQQLPAKRVHLSLWLDLYGDDQTRQKMESSVIKRCVQELRKSKLQNADVVQFV
ALLRANRVRYDKIDYLLENEVVLSWTDKFYSLPDARDQYHFLFNSLVRLYARLFSCYHFP
RLQKYLVLALDHLNFLYKTSLQQLQMIPPPKHRFVSQREPSLSKLVEATENLSFKPQRKI
TITLKQLLDDYCQEHDLFVLPESTLMAGKAMYRVTRNMKSGLLIYLDDDVVWAKTGADFE
PVAFNELEHYVH
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatcctttgcaatttcagcgacgacggcgggcttccgaggatgatgacagcagc
gaggatgaacgtcctggcctgggaaggccaaaggacattgcagacgaacagccgctaaca
gacgtggacagacagtatggtatcggtgcctcgttgctgcgtcagatgggttacgtcgag
ggaaaagggctgggaaaggccgaacagggaattgtggcccccatagagaccaagatgcgt
ccgcgaggactgggaattggcggtttcgatgaaaaatcgccggaagaagtctcgtctgac
gatgagccaatctccgaggtggcatttgaaagcactctgccgtctctgtactcgctgatc
gagcagtttgagcaacttggtactaccgtgcctgtaaaaatcaaagagatgtgtgacaac
ggctttgaaacggttgaaatacgaacagctttggcgggcatgctcgaacagctcaaagac
gtccaggccaagatcgattttgctcagcacgagctggagcaacagcggaagatagaggcg
gtatcaagagagcgccgtttggcgctgcagcgagttttggacggaaatcatggaatgatc
gaggatgacgaggacagggagatggcggccaagatgttgatggccaagctagagcctcta
gttcgcgagctaatggactcgtgggatcctaccaatcttgattcgaatgttccagatcgg
ttgctggagtataagagcgaattttctctatttgaatctgatcacgacaatgcctaccag
gctctagtcagtcaattatgggagaagaaggccggcgagttctatgctacaaaatggtct
gtttggcagccaaatctggggatcgcattgattgaggattttcaggaactcgtgtctgaa
gcggctgttgcgcgaatgtacgaaaccgtgctgctgccgaaatttaaggacgaaattagc
cactggaaaatagaagagcctgggcccgagacgtggctgacagactggctgaacgtgatg
gatgagcggcttgtcgaccaggtggtggcaaacattttccagaaatacgcggactggata
ctcctcggatggaacatagaggagcagcagcttccggcaaagagagttcatctgagtctg
tggcttgatctgtacggagatgaccagaccagacaaaagatggagtcctctgtgatcaaa
agatgcgtccaggagctgagaaaaagcaagctccagaacgctgacgttgtgcagtttgtc
gctcttctacgtgcgaacagagttcggtacgacaagatcgactatctgcttgaaaacgag
gttgttctgtcgtggaccgacaaattttactcccttccagatgccagagaccagtaccac
ttccttttcaactctctggttcgactgtacgcacggctattttcatgctaccattttccg
cgactccaaaaatatctcgttttggcactcgaccacctcaacttcctatataaaacttcc
ctacaacagctccagatgattcccccgccaaaacaccgttttgtttcgcagcgggaacct
tcgctatccaagctggtggaggccacggaaaacctcagtttcaagccgcaaagaaaaatt
accattactctcaaacagctgctggacgactactgtcaggagcacgaccttttcgtcctg
cctgagtccactttgatggcaggaaaggctatgtatcgcgtcaccagaaacatgaagagc
ggtcttctgatatatctggacgacgacgtcgtatgggcgaaaactggtgcagacttcgag
cccgtcgcgtttaacgaattggaacattatgtacattaa
DBGET
integrated database retrieval system
