Ogataea parapolymorpha: HPODL_05048
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Entry
HPODL_05048 CDS
T08137
Name
(RefSeq) putative ribosomal rna-processing protein
KO
K14545
ribosomal RNA-processing protein 7
Organism
opa
Ogataea parapolymorpha
Pathway
opa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
opa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
HPODL_05048
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
opa03009
]
HPODL_05048
Ribosome biogenesis [BR:
opa03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
HPODL_05048
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_Rrp7
RRP7
Sec8_N
Motif
Other DBs
NCBI-GeneID:
25774471
NCBI-ProteinID:
XP_013936884
UniProt:
W1QKA9
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Position
II:946044..946910
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AA seq
288 aa
AA seq
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MAPPLQIKGYTVFPVVFDATAHTKKTLHYMFVKKHVTKSLPESQSRSLFIVNIPVGTTVK
AVRSVFSTIAMGAIVESLATNEHYSERNMINYDYEINLTKLTNEEMTHEEEHPQIPVGCA
VVTFVDKNALNLAFGAIKKLVNASSAKYPMWKSELVTGYKRYTASKKLDSEQLAAQVAQV
MSDFQQREQQLKEELTNMQSMVDEDGFTLVVGSHRKTKNGILGSLKRAADLEQDEKVVKK
MKKKEKQDFYKFQIRERKKQEMNELLNKFKEDQERVRQMKEKRQFKPF
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggctccaccactccagatcaagggatacactgttttccctgtcgttttcgacgccaca
gcgcacaccaagaagaccctgcactacatgtttgtgaaaaaacatgtcactaagtcgttg
ccggagtcgcagtcccggtctctgttcatagtcaatatacccgtgggcaccactgtgaag
gccgtgcgaagtgtcttcagcacgattgccatgggcgccattgtggagtcgttggccacg
aacgagcactatagcgagcggaacatgataaattacgactacgagatcaatcttaccaaa
ctcaccaacgaggagatgacgcacgaagaagagcaccctcagatccctgttgggtgcgcg
gtggtgacatttgtggataaaaatgcgttgaatttggcctttggggcgatcaagaaactc
gtgaatgcctcgagcgcaaagtacccgatgtggaagtcagagctcgtcactggctacaaa
cggtacacggcttctaaaaaactggactcggagcagctggcggcccaggtggcacaggtg
atgtctgatttccagcagcgcgaacagcagctcaaggaagagctgacaaatatgcaatcg
atggtggacgaggacgggttcacgttggttgttggatcgcacagaaaaacgaaaaacggc
attctcgggtcgctgaaacgcgctgcagacctggagcaggacgaaaaggtggtgaagaag
atgaaaaagaaggagaaacaggacttctacaagttccagatcagagagcgcaaaaagcag
gagatgaatgagttgctcaataaattcaaagaggaccaggaacgcgtgcgccagatgaag
gaaaaacggcagttcaagcctttctag
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