KEGG   Ogataea parapolymorpha: HPODL_05357
Entry
HPODL_05357       CDS       T08137                                 
Name
(RefSeq) hypothetical protein
  KO
K15171  transcription elongation factor SPT4
Organism
opa  Ogataea parapolymorpha
Pathway
opa03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:opa00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    HPODL_05357
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:opa03021]
    HPODL_05357
   03019 Messenger RNA biogenesis [BR:opa03019]
    HPODL_05357
Transcription machinery [BR:opa03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     HPODL_05357
  RNA polymerase I system
     HPODL_05357
Messenger RNA biogenesis [BR:opa03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    DRB sensitivity inducing factor (DSIF) complex
     HPODL_05357
SSDB
Motif
Pfam: Spt4
Other DBs
NCBI-GeneID: 25774779
NCBI-ProteinID: XP_013932730
UniProt: W1QAC6
LinkDB
Position
VII:961421..961811
AA seq 117 aa
MSQKRGRPAPKLNRACMLCGLVQSMSQFRNEGCPNCESVLHFADNDDLVRECTSPTFEGL
VATHGDQGSWVARWLRIENFVPGLYAVRVLGKLPDDVRGDLQAQGIEYRPRDGSIQD
NT seq 354 nt   +upstreamnt  +downstreamnt
atgtcgcagaaaagaggaagaccagcacctaagctcaatagggcctgtatgctctgtggt
cttgtgcagtcaatgagccaatttcgtaacgaaggatgtccaaactgtgagtcagtttta
catttcgcagacaatgacgatctcgttcgagagtgcacttcgcctacctttgaaggactt
gttgctactcatggagatcagggatcatgggtggcgagatggctcagaattgagaatttt
gtgccaggattatatgctgtgcgggttctcggcaaattgcctgacgatgtccgaggcgac
ttgcaggcacagggcattgaatacagaccgcgcgatggatccatccaagattaa

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