Oceanimonas pelagia: PU634_00165
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Entry
PU634_00165 CDS
T09373
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
ope
Oceanimonas pelagia
Brite
KEGG Orthology (KO) [BR:
ope00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ope03400
]
PU634_00165 (sbcD)
DNA repair and recombination proteins [BR:
ope03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PU634_00165 (sbcD)
Archaeal homologous recombinant proteins
PU634_00165 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
WMC10813
UniProt:
A0AA50KNK3
LinkDB
All DBs
Position
31344..32561
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AA seq
405 aa
AA seq
DB search
MRILHTSDWHLGQHFMGKTRLDEHAAFLAWLVEQVHHHKVDAVLVAGDIFDTGTPPSYAR
ELYHNFVVAMSRTGAGLVLLGGNHDSVAMLNESRELLDALRVRVIPGVQAEPEQQLITLV
NRAGEPAALLCAIPFLRPRDLLESRAGDSADDKSRALQQAIAAHYQQLFERAQARRVALG
GELPIIATGHLTTVGASRSDSVRDIYIGTLEAFPAGAFPPADYIALGHIHKPQKVGGCEH
IRYSGAPLALSFDEAGQQKQVLLVELGTCGLQSVTPVPVPVFQPLGRVTGSLKALETALP
EVASAGTAERPVWLEVTVTEDDYLSDLQPRVQALCDGLHVEVLMVRRGRRERGAALVAEQ
KETLSELTPQQVFERRLAVEELAQDDEAGLTELYAQVLASLEEPA
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattctgcacacttccgactggcatctgggccagcacttcatgggcaagacccgg
ctcgacgagcacgccgcctttcttgcctggctggtcgagcaggtgcatcaccacaaggtg
gatgcggtgctggtggccggcgacattttcgataccggcacgccgcccagctatgcccgc
gagctgtaccacaactttgtggtggccatgagccgcaccggcgccggcctggtgctgctg
ggcggcaaccacgattcggtggccatgctcaatgagtcccgtgaactgctggatgccctc
agggtgcgggtgatccccggggtgcaggccgagccggagcagcagctgattaccctggtc
aaccgggccggcgagccggcggcgctgctctgcgccattccctttctgcgcccgcgggat
ctgctggaaagccgggccggcgacagcgccgacgacaaaagccgggcgctgcagcaggcc
attgcggcgcactatcagcagctgtttgaacgggcgcaggcccgccgtgttgcgctgggc
ggtgagctgcccattatcgccaccggtcacctcactaccgtgggggccagccgcagtgac
tcggtgcgggacatttacatcggcaccctggaggcttttcccgccggcgcctttccacct
gccgactacattgccctcgggcacatacacaagccgcaaaaggtgggcgggtgcgagcac
attcgttacagcggcgcgccgctggcgctgagctttgatgaagccggccagcaaaagcag
gtgctgctggtggaactgggcacctgcggcctgcagagtgtcacgccggtgccggtaccg
gtgtttcagcccctggggcgggtaacgggcagcctgaaggcgctggaaacggcgctgccc
gaggtcgcctcggcgggcacggcggagcgcccggtgtggctggaggtgaccgtcaccgaa
gacgactacttgagtgatttgcagcccagggtgcaggctctgtgcgacgggctgcacgtc
gaggtactgatggtgcgccggggccggcgcgagcgcggtgcggccctggtggccgagcaa
aaggaaaccctgagcgagctgaccccgcagcaggtgtttgagcggcggctggcggttgag
gaactggcgcaggacgatgaagctgggctgactgagctttatgctcaggtgttggcgagc
ctggaggagccggcatga
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