Oceanimonas pelagia: PU634_03105
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Entry
PU634_03105 CDS
T09373
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
ope
Oceanimonas pelagia
Pathway
ope02020
Two-component system
ope02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ope00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PU634_03105
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PU634_03105
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
ope02022
]
PU634_03105
02035 Bacterial motility proteins [BR:
ope02035
]
PU634_03105
Two-component system [BR:
ope02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
PU634_03105
Bacterial motility proteins [BR:
ope02035
]
Flagellar system
Flagellar assembly proteins
Others
PU634_03105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
HTH_30
HTH_20
HTH_24
HTH_28
AAA_16
Mg_chelatase
AAA_2
AAA
FleQ
HTH_23
MerR
MCM
Sigma70_r4_2
AAA_19
HTH_29
HTH_11
HTH_38
HTH_50
AAA_3
HTH_7
HTH_Tnp_ISL3
HTH_5
Xre-like-HTH
HTH_Crp_2
MarR_2
AAA_22
bpMoxR
nSTAND3
HTH_Tnp_1
AbiEi_4
HTH_3
HTH_17
HTH_10
AAA_7
Motif
Other DBs
NCBI-ProteinID:
WMC11366
UniProt:
A0AA50QCQ9
LinkDB
All DBs
Position
671372..672700
Genome browser
AA seq
442 aa
AA seq
DB search
MNTDILVVEDDTGLQQALQDTLELAGLECTCVVSAEDAMIYLQQAPVRMVITDVQMAGMN
GLELLGWIGERLPGLPVLVITAHAQVAGAVAAMRAGAVDYLAKPFTPDALLERVRRYVRP
ALHSHEDPIAEDAASRQLLQLAARVAATDASVMISGPSGTGKEVLARFIHRRSSRADKPF
VAINCAAIPDNMLEATLFGYEKGAFTGAVQACAGKFELAQEGTLLLDEITEMDVALQAKL
LRVLQEQEVERLGGRKTLRLNVRVLATSNRDLRQAVSEGSFREDLYYRLNVFPLAWPSLA
DRPADILPLARFLLNCHARAQGRHGVVLSAEAEFRLQGWHWPGNVRELDNVMQRALILAA
GTEITAGDILLDDGSPVSVPVPAATAAELGEALENQEHRIILQALHNSGGSRREVAERLG
ISPRTLRYKLARMREAGIKVPA
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccgatattctggttgtggaagacgacaccggtctgcagcaggcgctgcaggat
accctggagctggccggccttgagtgcacctgtgtggtcagtgccgaagacgccatgatt
tatctgcaacaggcgccggtgcgtatggtgatcaccgacgtgcaaatggccggcatgaat
ggcctggagctgctcggctggataggcgagcgcctgcccgggctgccggtgctggtgatc
accgcccacgctcaggtggcgggggcggtggccgccatgcgtgccggtgccgtggattat
ctggccaagccctttacccccgatgccctgctggagcgagtgcgccgttatgtgcgtccg
gcgctgcacagccatgaagatcccattgccgaagacgccgccagccgccagttgctgcaa
ctggcggccagagtggcggccaccgatgccagcgtgatgatctcgggtcccagcggcacc
ggcaaggaagtgctggcgcgcttcattcaccgccgttcaagccgggccgacaaacctttt
gtggccatcaactgcgcggccattcccgacaacatgctggaagccaccctgttcggctat
gaaaagggcgcctttaccggcgcggtgcaggcctgtgccggcaagttcgagctggcccag
gaaggtaccctgttgctggacgagatcaccgaaatggacgtggcgcttcaggccaagctg
ctgcgggtgctgcaggagcaggaagtggagcggctgggcggacgcaaaaccctgaggctg
aacgtgcgggtgctggccaccagcaaccgggatctgcgtcaggcggtcagtgaaggcagt
ttcagggaagatctctactaccggctgaatgtgtttccgctggcgtggccgtccctggcc
gatcgccccgccgacattctgcccctggcccgctttctgctgaactgccacgctcgggcg
cagggccggcatggtgtggtgttgtctgccgaggccgaattccggttgcagggctggcac
tggccgggcaatgtgcgcgagctggataacgtgatgcagcgggcgctgatcctggccgcc
ggcaccgagataacggccggcgacattttgctggacgacggcagcccggtttccgtgccg
gtgccggccgccaccgctgcggagctgggagaagcgctggaaaaccaggagcaccgcatt
attctgcaggcgctgcacaacagcggcggcagccggcgtgaagtggcggagcggctgggc
atcagtccgcgcaccctgcgttacaagctggcgcgcatgcgcgaagcggggataaaggta
cccgcctga
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