Oceanimonas pelagia: PU634_03200
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Entry
PU634_03200 CDS
T09373
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
ope
Oceanimonas pelagia
Pathway
ope02020
Two-component system
ope02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
ope00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PU634_03200
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PU634_03200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ope03021
]
PU634_03200
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ope02035
]
PU634_03200
Transcription machinery [BR:
ope03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PU634_03200
Bacterial motility proteins [BR:
ope02035
]
Flagellar system
Flagellar assembly proteins
Stator
PU634_03200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
GerE
Motif
Other DBs
NCBI-ProteinID:
WMC11383
UniProt:
A0AA50KPL8
LinkDB
All DBs
Position
689728..690450
Genome browser
AA seq
240 aa
AA seq
DB search
MFGGSKAQAYARHNTQGLVERHADLVRRIAQHLLARLPDSVLLDDLIQSGMVGLLEAAKN
FDASKGASFETFAGIRIRGAMLDEIRRGDWVPRSVHRNGRQIAEAMHSIQRREGRPAQDR
EIAEELGVSIGQYHAMLADVNHGKLLEMDEFEQGVEYQACSSVHAGSPFEGMARDRFQHA
LAEGIRKLPEREALVLSLYYDEELNLREIGQILEVSESRVSQIHSQAMLRLKSRLKDWKI
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgttcgggggtagcaaggcgcaggcctacgcccggcacaatacccaggggctggtggag
cgccatgccgatctggtgcgccgcattgcccagcatttgctggcacgtctgcccgacagc
gtgttgctcgacgatctgatccagtcgggcatggtgggcctgctggaggcggcgaaaaac
tttgacgcctccaagggggccagtttcgagacctttgccggtattcgcattcgcggcgcc
atgctcgacgaaattcgccggggcgactgggtgccgcgttcggtgcaccgcaacggccgt
cagattgccgaggccatgcacagcattcagcggcgggaagggcgcccggcccaggaccgg
gaaattgccgaggagctgggggtctctatcggtcagtatcacgccatgctggcggacgtg
aatcacggcaaattgctggagatggacgagtttgagcagggcgtagagtatcaggcctgc
tcctcggtccatgccggcagcccctttgaaggcatggccagagaccgttttcagcacgcc
ctggccgagggcattcgcaagttgccggagcgggaagccctggtgctgtcgctctattac
gacgaagagcttaatctgcgggaaatcggtcagatcctggaggtatccgagtcccgtgtg
agccagatacacagtcaggccatgctgcggctgaaatcgcgcctgaaagactggaaaatt
tga
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